Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01875 ATGAAGCTGCTTCTTCTTCCCCAATACCCGAGAGTAGAGGCCAAAGACGGAATCACGGTCACGGAGAGAGGCAGAGAGCCATCGGAGAGCAGAGCTTCTTCTTCTTCTTTTTCTTCGAGCCCTCCGCCGCGCCATCCTCTTCATAACAGTTTTGGCAATGGAAAGCTTCTAGAGAGAAAGAACTTCTGCAACATTGAAAAATTAAAGCCTGAGAAGGAGGTTCAACGAGCTAAGTCTGAAATTCTTAGGAGAAAATTGAAAATTAGGGATCTATTTTGGAATTTGGGTTTATTTTGTGCTAAAGGAAGGCTTCCAGAGTCTTTGTTTGATTCCGAAGGAGCAATACGAAGTGACGATATTTTCTGTGCAAAATGCGGGTCCAAAGAGCTGACCACTGATAATGATATAATTCTCTGTGATGGTGCTTGTGACCGTGGATTTCACTAA 447 0.434 MKLLLLPQYPRVEAKDGITVTERGREPSESRASSSSFSSSPPPRHPLHNSFGNGKLLERKNFCNIEKLKPEKEVQRAKSEILRRKLKIRDLFWNLGLFCAKGRLPESLFDSEGAIRSDDIFCAKCGSKELTTDNDIILCDGACDRGFH 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01875 148 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 65 148 - -
Aip09g01875 148 MobiDBLite consensus disorder prediction 30 46 - -
Aip09g01875 148 MobiDBLite consensus disorder prediction 16 53 - -
Aip09g01875 148 SUPERFAMILY FYVE/PHD zinc finger 114 148 IPR011011 -
Aip09g01875 148 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 148 IPR013083 -
Aip09g01875 148 PANTHER HOMEOBOX PROTEIN HAT3.1 65 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01875 Aip-Chr9 53551567 53552854 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01875 57 148 Homeobox Transcription Factor Family AT3G19510 68.478 2.40e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01875 - - adu:107488674 170.629