Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01858 ATGGAGCAAGCGGTTGTGGACGACATAATAAACCGATTGCTGGAAGTTCGGGGGAGGCCGGGGAAGCAGGTGCAGCTCTCGGAATCGGAGATCAAGCAGCTGTGTGCCGCTTCCAGAGAGATTTTCTTGCAGCAGCCCAATTTGTTGGAGCTTGAAGCCCCCATTAAGATTTGCGGTGATGTACATGGTCAATATTCTGATCTTTTAAGGCTTTTTGAGTATGGTGGATTACCACCTGAGGCCAACTACTTGTTTTTGGGTGATTATGTAGATAGAGGGAAGCAGAGTTTAGAAACAATTTGCCTTCTCCTTGCTTATAAGATAAAATATCCTGAGAACTTTTTCCTTTTGAGGGGGAATCATGAATGTGCTTCTATAAACCGTATATATGGATTTTATGATGAGTGTAAAAGAAGGTTCAATGTAAGGTTATGGAGGACATTTACAGAATGCTTCAATTGCCTGCCTGTGGCAGCTCTCATTGATGAAAAAATTTTGTGCATGCATGGGGGACTTTCTCCTGACTTGAACAATTTGGATCAGATTAGAAATCTTCAGCGGCCAACTGATGTACCAGATACGGGTTTGCTATGCGATCTCCTATGGTCAGATCCAAGCAAAGAAGTTCAAGGTTGGGGAATGAATGATAGGGGTGTTTCATATACATTTGGTGCAGATAAGGTCTCCGAGTTTCTTCAGAAACATGATTTGGATCTTATTTGTCGTGCTCATCAGGTGGTGGAGGATGGATATGAGTTCTTTGCTAACCGACAGCTTGTAACAATATTTTCAGCACCCAATTATTGCGGGGAATTTGACAATGCTGGCGCTATGATGAGTGTTGATGAAACTCTAATGTGCTCCTTCCAAATATTAAAGCCTGCTGATAGAAAAGGAAAGCTCAATTTTGGAAGTACAACTGCTAAGCCAGGAAACTCTCCAGCTGGTGTGAAGTCCTTCCTAGGTCTTGCTCTTGTGTTCTTCAGATGTTTTGTTTCTGAGACGAAAATGGATCTTTACGTTTCATCCTCCTATCCAAAACTTTTACTATATTTCAATCTTGAACAACCCAACAATGGAACTCACGGCGACGGCGAAGAGTCCAATTCGGCACGGGTACGTTCGCACTTCGCAGAGCGTGGTGCTCGACACACAGAGAGAGATAGATGGCTCGAAGACAGAGGCATTTTGACGACGAGAAAGAGGCGGCCGATGACGGTGAGGACAGAGGCGGGCTTTACGACGAGCACAAAGACAGTGAGGAGAAGAGTGGTGGCGGCTGAGAGTGAGAGTGAGAGAGACACTGAAACAACGAGAAGAAGCCATGCACATCAACTCAAACACAACTCCACTGCCTCCTTCCTCTGCCGCTTTCGAGGGCTCCGCTCATTCTTCCGCTCCTCTCCAAAGCTGGCACCTTTGAGATTAGGGATTTTGCCAGTTGAGAGTGAGACTGAGACTGAGACTGAGAATGAGCGAGAAGGGAGAGGGGCATTTGGGAGTCTTCACGCGTTTCCTTTTTTTTGA 1527 0.4545 MEQAVVDDIINRLLEVRGRPGKQVQLSESEIKQLCAASREIFLQQPNLLELEAPIKICGDVHGQYSDLLRLFEYGGLPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWRTFTECFNCLPVAALIDEKILCMHGGLSPDLNNLDQIRNLQRPTDVPDTGLLCDLLWSDPSKEVQGWGMNDRGVSYTFGADKVSEFLQKHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADRKGKLNFGSTTAKPGNSPAGVKSFLGLALVFFRCFVSETKMDLYVSSSYPKLLLYFNLEQPNNGTHGDGEESNSARVRSHFAERGARHTERDRWLEDRGILTTRKRRPMTVRTEAGFTTSTKTVRRRVVAAESESERDTETTRRSHAHQLKHNSTASFLCRFRGLRSFFRSSPKLAPLRLGILPVESETETETENEREGRGAFGSLHAFPFF 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01858 508 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Aip09g01858 508 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Aip09g01858 508 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Aip09g01858 508 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Aip09g01858 508 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Aip09g01858 508 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Aip09g01858 508 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Aip09g01858 508 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 319 - -
Aip09g01858 508 MobiDBLite consensus disorder prediction 423 443 - -
Aip09g01858 508 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
Aip09g01858 508 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Aip09g01858 508 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Aip09g01858 508 SMART pp2a_7 26 296 IPR006186 GO:0016787
Aip09g01858 508 SUPERFAMILY Metallo-dependent phosphatases 18 297 IPR029052 -
Aip09g01858 508 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 319 - -
Aip09g01858 508 MobiDBLite consensus disorder prediction 420 445 - -
Aip09g01858 508 CDD MPP_PP1_PPKL 5 294 - -
Aip09g01858 508 Gene3D - 1 305 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01858 Aip-Chr9 52079987 52088198 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01858 55 239 Calmodulin-binding Proteins AT5G63870 33.484 2.12e-27 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01858 K06269 - gmx:100799218 647.121