Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01857 ATGTGTTCATCGCTGAAGGGGCAATACGAGATAAGCGAAGAAATAGGGAGAGGGCGTTTCGGCACAATATACCGGTGCTACGACGTCGTTTCAGGAGAAGTATACGCCTGCAAAGTAATCGACAAATCAATCCTAGCAGACGAAACGGACCAGCAGTGTATACTGAACGAACCGAAGCTGATGTCACTCCTAACCCCTCACCCTAACATCCTCACTATCCACAACGCCTTCGAAGACGACCGCTCTCTCTCTCTCATCCTCGACCTCTGCCTTCCCCTCACCCTCCTCGACCGCCTAACTGCCTCAACTGTCACTCCATTCCCCAACGCCTGCCACGTCATCACGCAGCTTCTAGAAGCCGTTTCTCACTGCCACCGCAGCGGCATCGCGCATCGCGACTTGAAGCCCGAGAATATTCTCTTTGATTCCAGAGACATCTTGAAGCTCGCCGACTTTGGCTCCGCCGAGTGGTTCGCCGGCGATGGCGGGGGTCTGATGAGCGGTGTGGTGGGGACGCCGTATTACGTGGCGCCGGAAGTATTGATGGGGAGGGAGTATGATGAGAAAGTTGATGTGTGGAGCTGTGGAGTTATACTTTACATGATGTTGGCCGGTGCGCCGCCGTTTTACGGTGATTCCGCCGTCGAGATTTTCGAGTCTGTTCTTCGAGGGAACTTGAGGTTTCCGCCGAGGCTCTTCCGGAATGTGTCGCCGGCCGCCAAGGATTTGTTGCGGAAGATGATATGTAAGGACCCTTCTAGGAGGATCTCCGCCGAACAAGCCTTGAGGCACTCATGGATCTTGAGGGGAGGTGAGAGTGAGGCAGCTGAACTAACTTGA 840 0.544 MCSSLKGQYEISEEIGRGRFGTIYRCYDVVSGEVYACKVIDKSILADETDQQCILNEPKLMSLLTPHPNILTIHNAFEDDRSLSLILDLCLPLTLLDRLTASTVTPFPNACHVITQLLEAVSHCHRSGIAHRDLKPENILFDSRDILKLADFGSAEWFAGDGGGLMSGVVGTPYYVAPEVLMGREYDEKVDVWSCGVILYMMLAGAPPFYGDSAVEIFESVLRGNLRFPPRLFRNVSPAAKDLLRKMICKDPSRRISAEQALRHSWILRGGESEAAELT 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01857 279 CDD STKc_CAMK 8 266 - -
Aip09g01857 279 Gene3D Transferase(Phosphotransferase) domain 1 2 278 - -
Aip09g01857 279 PIRSF ILK 3 263 - -
Aip09g01857 279 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Aip09g01857 279 SUPERFAMILY Protein kinase-like (PK-like) 6 268 IPR011009 -
Aip09g01857 279 PANTHER SERINE/THREONINE-PROTEIN KINASE 4 275 - -
Aip09g01857 279 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 1 4 275 - -
Aip09g01857 279 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Aip09g01857 279 ProSiteProfiles Protein kinase domain profile. 9 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g01857 279 Pfam Protein kinase domain 9 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g01857 279 SMART serkin_6 9 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01857 Aip-Chr9 51700334 51701621 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01857 9 273 EF-hand Containing Proteins AT1G50700 39.552 8.18e-71 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Aip09g01857 Pkinase 1.2e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01857 - K08794 adu:107465518 525.783