Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01854 ATGACCTTGACTTACACAATTGGCACACCCTCTCTCTTGAAAACTTCATCTTTCTCCATCTTCATGCACTCCAAAGAACATCGAAGAACCCTAGCACTCCGTGAAGAACCACAGCACTCTGCGAAGAACATCGCTGACGCTGCAATGCCTCCGTCGATGCTCCCTTCGCCGCCGCTCCCTTCTTTGCTGCAAACCCCTAACCCCTTTCCATTTTTCACTGGGCTATCGAGCCAGCAGGTAGCAGCGTCTTCATcccctgcgccatcgcgtcgagccccttcgccctccatcgtcgtccagcgcctctccctttctgacagccaccgcgtcttactccacttcctacactACAGTCCTTTCAACACAGAGCTAGGGCTCGGACATTGCAAGGGTTTCTACAATGCAAACAAATTTGCCAAGCTTGTGAGAAGAAGAGAGTTCATGGCCAGCGCCGCTGAGGGAACCACCGGGGCTCTTACCTGCGCCACTTGTAGCTGCCATAGAAACTTCTATAGAAGAAAGGAACTAGCTGCACCATCCAGTCAGGTGCAGGCTCCAGCTGTGCAAATTCAAGAGCCAAAATCTAAATCTGATTGCTATGGAGTTTTCTGCCTCACCTATGATTTGAAGGCTGAGTAG 639 0.4225 MTLTYTIGTPSLLKTSSFSIFMHSKEHRRTLALREEPQHSAKNIADAAMPPSMLPSPPLPSLLQTPNPFPFFTGLSSQQVAASSSPAPSRRAPSPSIVVQRLSLSDSHRVLLHFLHYSPFNTELGLGHCKGFYNANKFAKLVRRREFMASAAEGTTGALTCATCSCHRNFYRRKELAAPSSQVQAPAVQIQEPKSKSDCYGVFCLTYDLKAE 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01854 212 Pfam ZF-HD protein dimerisation region 145 175 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01854 Aip-Chr9 51566926 51569611 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01854 145 174 ZF-HD Transcription Factor Family AT1G74660 63.333 8.36e-09 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Aip09g01854 ZF-HD_dimer 9.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01854 - K00051 adu:107468004 75.485