Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01827 ATGTCCCAACCATCTCGTGCCGTTCTTATCTTCTGCAAAGTTAATGGAATAGAATTCGACGAGATTAGAGTTGAAATCTCCAAAAGACAGCAGTTATCTCCCGAATTTGCAGCTATCAACCCTTTCAAGAAACTCCCTGCTATTGTTGATGGAAGGTTCAAGCTATTCGAGAGACGTGTTCTTTTCTTCTTGGCAGTTACATTATCTAACTCTGACTTTCCAACACAGATTTCGTGGATGGAGAAGTTTTTACGGAAGAGAACTGAGATCACTGCGCCTGTTCCAATGACACCAGAAGAACCACATTTTAATCCTAATAAGATGAAACATGGTGCTCCGGGAGATCAAATTTGCCATGCGGGTGACCTGGAAAACATAGTTGCTAATGCAGATGGAGTTGCAGAAGCAACAATTGTCGACAATCAGATACCACTGATTGGCCCCAATCCAGTAGTTGGAAGAGCCTTGGTGGTTCATGAGCTTGAGGATGACCTTGGAAAAGGTGGGAAGGAACTCAGCTTGAGCACTGGAAATGCTGGTGGAAGATTGGCATGTGGTATGAAGAATTTTATGAACAATAGTAGTTCTATCCTTTTCAAATACATCAATCAATCCATTCCATCTGATTATATATTGTTTGATGCACTTTGA 651 0.4147 MSQPSRAVLIFCKVNGIEFDEIRVEISKRQQLSPEFAAINPFKKLPAIVDGRFKLFERRVLFFLAVTLSNSDFPTQISWMEKFLRKRTEITAPVPMTPEEPHFNPNKMKHGAPGDQICHAGDLENIVANADGVAEATIVDNQIPLIGPNPVVGRALVVHELEDDLGKGGKELSLSTGNAGGRLACGMKNFMNNSSSILFKYINQSIPSDYILFDAL 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01827 216 PANTHER SUPEROXIDE DISMUTASE CU-ZN -RELATED 100 203 IPR024134 -
Aip09g01827 216 PANTHER SUPEROXIDE DISMUTASE [CU-ZN] 100 203 - -
Aip09g01827 216 SUPERFAMILY Cu,Zn superoxide dismutase-like 99 186 IPR036423 GO:0006801|GO:0046872
Aip09g01827 216 Gene3D Superoxide dismutase, copper/zinc binding domain 95 194 IPR036423 GO:0006801|GO:0046872
Aip09g01827 216 SUPERFAMILY Thioredoxin-like 2 60 IPR036249 -
Aip09g01827 216 CDD Cu-Zn_Superoxide_Dismutase 101 185 IPR001424 GO:0006801|GO:0046872
Aip09g01827 216 Pfam Copper/zinc superoxide dismutase (SODC) 100 186 IPR001424 GO:0006801|GO:0046872
Aip09g01827 216 PRINTS Cu-Zn-superoxide dismutase family signature 119 128 IPR001424 GO:0006801|GO:0046872
Aip09g01827 216 PRINTS Cu-Zn-superoxide dismutase family signature 163 189 IPR001424 GO:0006801|GO:0046872
Aip09g01827 216 PRINTS Cu-Zn-superoxide dismutase family signature 138 160 IPR001424 GO:0006801|GO:0046872
Aip09g01827 216 Gene3D Glutaredoxin 1 71 - -
Aip09g01827 216 Pfam Glutathione S-transferase, N-terminal domain 7 59 IPR004045 -
Aip09g01827 216 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 73 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01827 Aip-Chr9 49282338 49283767 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01827 1 114 Glutathione S-transferase Gene Family AT5G41210 48.276 7.65e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01827 K04565 - gmx:100527058 161.77