Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01820 ATGGGGTTCGAATTAGATGCTGTGGTTTCGAAATTGCAAAATCTTGCCACTTCTGATCATTCCTCTGTGGTGTCAATGAACATCTTTGTTGCACTTCTGTGTGCTTGTATTGTTATTGGCCATCTTCTTGAGGAAAATCGGTGGATGAATGAATCTATCACTGCCCTTTTGATTGGCGTTTGCACTGGTGTGTTCATTTTGCTGGTCAGTGGTGGTACACACTCGCATATTCTTGTCTTCAGTGAAGATCTTTTCTTCATATACCTTCTTCCACCTATAATATTCAATGCCGGGTTTCAAGTGAAAAAGAAGCAGTTCTTTGTTAACTTCATCACCATCATGATGTTTGGTGCAGTTGGTACATTAATATCGTGTACCATCATAACCTTCGGTGTTACACAAATTTTCAAGAGGATGGATATTGGTCCTATGGAAATAGGGGACTATCTAGGTAATATGTTTATCAGTTTTATCTACTTGTCAACTGCTTGCTCTGTTTGTAACTCACTGACTAGTGTAAATATTTCAGCAATTGGTGCAATATTTGCCGCAACAGATTCTGTGTGCACATTGCAGGTGCTAAATCAAGATGAGACACCTTTATTGTACAGTCTTGTATTTGGGGAGGGTGTTGTGAATGATGCCACATCAGTGGTGCTTTTCAATGCAATCCAAAGCTTTGACCTTGAGCAAATTGACCCGTCAATTGCTTTGCAATTTATTGGCAACTTCTTGTATCTGTTTCTCACAAGCACATTGCTTGGAGTTGGGGCAGGGCTGCTTAGTGCTTACATTATAAAGAAGCTGTATATTGGCAGACACTCTACAGATCGTGAGGTTGCTCTCATGATGCTCATGGCATACCTCTCCTACATGGTGGCCGAGTTGTGCTATCTGAGTGGCATTCTCACTGTATTCTTTTGCGGAATTGTTATGTCTCATTATACTTGGCATAATGTGACAGAGAGCTCAAGAGTCACCACCAAGCACGCATTTGCAACCATATCGTTTGTTGCTGAGATATTTCTCTTCCTTTATGTTGGTATGGATGCCTTGGACATTGAAAAGTGGAGTTTTGTCAGTGATAGACCTGGAACATCAGTAGCAGTGAGTGCAGTATTGATGGGTCTAGTACTTGTTGGAAGAGCAGCTTTTGTTTTCCCGTTATCGTTCTTATCCAACTTGGCCAAAAAGTCATCAAGCGAGAAAATCACTTTCAGGCAGCAAGTGATTATTTGGTGGGCTGGTCTTATGAGAGGTGCTGTTTCAATGGCACTTGCATATAATCAGTTCACTATGTCCGGGCATACACAACAGCAATCCAATGCTATCATGATCACCAGCACCATCACAGTTGTGCTTTTCAGCACAGTGGTGTTTGGTTTGATGACTAAACCACTCATAATGCTTTTGCTGCCTCCAAACCCTCATAAAGGTACAAGCTCCACGAACAGCATATTGAGTCCAAAATCAGTTACTGTCCCACTTCTAGCCCAAGAATCTGAAGCTGATCTTGAAGGCCATGAAGTTACTCGCCCAAGCAGTATTCGCAACTTGCTAACCAGGCCAACACACACCGTCCACAGATTATGGCATAAAAAATGCGTGTATGAAGAACCACCTTACTGA 1629 0.4193 MGFELDAVVSKLQNLATSDHSSVVSMNIFVALLCACIVIGHLLEENRWMNESITALLIGVCTGVFILLVSGGTHSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFITIMMFGAVGTLISCTIITFGVTQIFKRMDIGPMEIGDYLGNMFISFIYLSTACSVCNSLTSVNISAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLEQIDPSIALQFIGNFLYLFLTSTLLGVGAGLLSAYIIKKLYIGRHSTDREVALMMLMAYLSYMVAELCYLSGILTVFFCGIVMSHYTWHNVTESSRVTTKHAFATISFVAEIFLFLYVGMDALDIEKWSFVSDRPGTSVAVSAVLMGLVLVGRAAFVFPLSFLSNLAKKSSSEKITFRQQVIIWWAGLMRGAVSMALAYNQFTMSGHTQQQSNAIMITSTITVVLFSTVVFGLMTKPLIMLLLPPNPHKGTSSTNSILSPKSVTVPLLAQESEADLEGHEVTRPSSIRNLLTRPTHTVHRLWHKKCVYEEPPY 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01820 542 Gene3D - 173 223 - -
Aip09g01820 542 PANTHER SODIUM/HYDROGEN EXCHANGER 7 167 IPR018422 GO:0006812|GO:0015299|GO:0016021
Aip09g01820 542 PANTHER SODIUM/HYDROGEN EXCHANGER 2 172 533 - -
Aip09g01820 542 Pfam Sodium/hydrogen exchanger family 28 468 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Aip09g01820 542 PANTHER SODIUM/HYDROGEN EXCHANGER 172 533 IPR018422 GO:0006812|GO:0015299|GO:0016021
Aip09g01820 542 PRINTS Na+/H+ exchanger signature 179 189 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Aip09g01820 542 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Aip09g01820 542 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Aip09g01820 542 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Aip09g01820 542 PANTHER SODIUM/HYDROGEN EXCHANGER 2 7 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01820 Aip-Chr9 49020549 49026178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01820 7 533 Antiporters AT3G05030 71.402 0.0 764
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01820 - - gmx:100816746 824.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g01005 06 14452083 14457458 Aip09g01820 09 49020549 49026178 PCT