Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01807 ATGTCTTGCAGTGAAGAAGAGATTGCTCTTTTTTCCTATCAACAAGGATGTCTGGGTATGGATCTCTCCTATTTCAATCTGGGTAAAGAGTGTTGGTGTTCTGATCTAGCTTGTGAAGAAGGTCCTGTTGTGGCTGCTGAGCCAGCAGCTCCTGCTGAGCATAATATTGATTCGGAAGGAAAAGCTAGGAAGGTAACTGGTTGCTCCTGCGTAGTTGTGAAGGATTTTGGAGAAGAACATGAAGCCTATAATGTTGTCCTTCAGCACGTTAAAGCTCAATGA 282 0.4362 MSCSEEEIALFSYQQGCLGMDLSYFNLGKECWCSDLACEEGPVVAAEPAAPAEHNIDSEGKARKVTGCSCVVVKDFGEEHEAYNVVLQHVKAQ 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01807 93 Gene3D - 49 93 IPR029064 -
Aip09g01807 93 PANTHER 40S RIBOSOMAL PROTEIN S12 55 93 IPR000530 GO:0003735|GO:0005840|GO:0006412
Aip09g01807 93 PANTHER 40S RIBOSOMAL PROTEIN S12 55 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01807 Aip-Chr9 48014876 48017048 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01807 55 93 Cytoplasmic Ribosomal Protein Gene Family AT1G15930 64.103 3.96e-12 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01807 K02951 - gmx:100786733 80.1073