Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01794 ATGCAACAGGGTGACTTTCAAGGGGGGCTCAAGTTTGCTCTGAAGGCAAAGAAAATGTATACCGATGTTGAAAACATTGCTCAGATCCTTACAATTTGTGAGGTTCACAATGCAGCACAGAACAAACTTACTGGTGGAACTGACATGGACTGGTATGCTATTCTTCAGACAGAACAATTGGCCGATGAAGCAACCATAAAGAAGCATTATCGGAAGCTTGCACTACTCCTTCATCCTGATAAGAACAAATTTCCTGGTGCAGAAGCTGCTTTCAAGTTGATTGGGGAAGCCAACAGAGTGTTGGGTGACCAAGCAAAACGTTCTGTGTATGACATGAAATATCAGGTCTCTGTGAAACCTGCATTCACTGCAAGAAATGTTCAAAATGCAACAAATTATCAGAACAGTTATTTTCCAAACCCCACCTTTGGTAATGGCCATCATCAGCCCGAACCACAGTTATTTTGGGCATCTTGCCCACATTGTAGTACTAAGTGCCCATACTACAAAAACATTTTGAACACAACCTTACATTGTTATAAATGTTTCAATACCTTTCATGCTTTGGGGAACCAGAATGTCTCACCAGCGTATACAGGGGCAGCATTTACTATCCATAAGGAAGCTCGAAAGAAGGGTGCCCGAAAACCTGCTTCAAAAAGTAATGGTGGAGGAAATGCAGAGAACTCCGTGCCAGTGTCTATGAAGAAATGTGCTGCTAATGGAGTTGGTGGGCATCATAAAAGTCGAAAGAGTAATGATGGCTCTGCGGCTAGAGGGCAACCAAAGCGCAATGTTTCTGCATCTAAAGGGACCAAAACAACTGAATCACAGCACCCAACAAATGTTGGAAGTAAGAGAGTGAGACAGTCAGCCCCAGATCCAAGAGAAAATTTCAACTATTGCAATGGCAAAGGCAAAGCAGATGCCAACGTTCAGGAGAATGGGGTTGATCCTTCTACACTTAATGCTAGGAGATCTTCTAGGCAAAGGGTGCATGTTTCATATGTTGAAAGCGATGATAATGATGATTTGGAGAGCCCTTCCAAAAAGGAAGAGCCTGCAGGTGGAGGGTTGTCCAATAACAGTAATCCTGCTAGTTCTGCTGCTGGGGTAACCGATCAGAATGGAAAGGTGAGAAGTGAAGTTTGTGATCCACCTGAAGAAGCATTTTCACAGAACAAAAGCAAAATTGGGCACTCTCATATTCAAAGGGAGATGTCCAATGCAGATCCTGGTCTTAGAACCTCAAAAGAGGACCACTGCTCTCCATTTAATTCAAATGGCCCGTCTGATGCGGAGTACATTATTTGTCCTGATGCAGAATTCAATAATTTTGAGAAGCACAAGGCTGAGGAATGTTTTGCTGTTAATCAATTCTGGGCTATTTATGATCCTGCTGATGCTATGCCAAGATTTTATGCTCTCATAAAGAAAGTGTTCTCCCCTTTCAAGCTTGTGATTACTTGGTTAGAACCTGACCCAGGTAATGAAAGTGAGATTGATTGGCATAATGCAGATTTGCCTGTTGCTTGTGGTAAGTTCAGACTTTCTGGTTCTCAGAACACTACAGATGCTTGTATGTTTTCTCACCAAATAGGCTGTTTGAAAGGAAGTACCAGAGGTTCTTATCTGATATATCCCAAGAAGGGAGAAACTTGGGCAATTTTCATGGATTGGGATATCAAATGGAGTTCAAATCCAGAAGATCATTCAAATTATAAATTCGATTTTGTGGAAATCCTATCAAATTTCACTGAAAATGTTGGCACTGAAGTTGCTTTTCTCAGTAAAGTTCAAGGATTTATCAGCGTCTTTCAGAAAAATGAGAATGGAAAGAACACATTTTCCATTCCACCTAATGAGTTATATCGGTTCTCGCATCAAATTCCGTCATGCAAGATGACTGGTAGTGAAAGGGAAGGTGTTCCTAGAGGTTCTTTTGAATTTGATCCTGCTGCCGTTCCTCTTGATCTCCTTGGGAGGTCGTGA 1992 0.4177 MQQGDFQGGLKFALKAKKMYTDVENIAQILTICEVHNAAQNKLTGGTDMDWYAILQTEQLADEATIKKHYRKLALLLHPDKNKFPGAEAAFKLIGEANRVLGDQAKRSVYDMKYQVSVKPAFTARNVQNATNYQNSYFPNPTFGNGHHQPEPQLFWASCPHCSTKCPYYKNILNTTLHCYKCFNTFHALGNQNVSPAYTGAAFTIHKEARKKGARKPASKSNGGGNAENSVPVSMKKCAANGVGGHHKSRKSNDGSAARGQPKRNVSASKGTKTTESQHPTNVGSKRVRQSAPDPRENFNYCNGKGKADANVQENGVDPSTLNARRSSRQRVHVSYVESDDNDDLESPSKKEEPAGGGLSNNSNPASSAAGVTDQNGKVRSEVCDPPEEAFSQNKSKIGHSHIQREMSNADPGLRTSKEDHCSPFNSNGPSDAEYIICPDAEFNNFEKHKAEECFAVNQFWAIYDPADAMPRFYALIKKVFSPFKLVITWLEPDPGNESEIDWHNADLPVACGKFRLSGSQNTTDACMFSHQIGCLKGSTRGSYLIYPKKGETWAIFMDWDIKWSSNPEDHSNYKFDFVEILSNFTENVGTEVAFLSKVQGFISVFQKNENGKNTFSIPPNELYRFSHQIPSCKMTGSEREGVPRGSFEFDPAAVPLDLLGRS 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01794 663 PRINTS DnaJ domain signature 86 106 IPR001623 -
Aip09g01794 663 PRINTS DnaJ domain signature 52 70 IPR001623 -
Aip09g01794 663 PRINTS DnaJ domain signature 106 125 IPR001623 -
Aip09g01794 663 PRINTS DnaJ domain signature 70 85 IPR001623 -
Aip09g01794 663 MobiDBLite consensus disorder prediction 209 400 - -
Aip09g01794 663 Gene3D DnaJ domain 35 136 IPR036869 -
Aip09g01794 663 SUPERFAMILY Chaperone J-domain 47 115 IPR036869 -
Aip09g01794 663 SMART dnaj_3 49 106 IPR001623 -
Aip09g01794 663 MobiDBLite consensus disorder prediction 314 330 - -
Aip09g01794 663 CDD DnaJ 50 103 IPR001623 -
Aip09g01794 663 MobiDBLite consensus disorder prediction 356 375 - -
Aip09g01794 663 MobiDBLite consensus disorder prediction 255 288 - -
Aip09g01794 663 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 659 - -
Aip09g01794 663 MobiDBLite consensus disorder prediction 331 351 - -
Aip09g01794 663 PANTHER - 1 659 - -
Aip09g01794 663 Pfam Domain of unknown function (DUF3444) 436 639 IPR024593 -
Aip09g01794 663 ProSiteProfiles dnaJ domain profile. 50 114 IPR001623 -
Aip09g01794 663 Pfam DnaJ domain 50 111 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01794 Aip-Chr9 47345100 47347091 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01794 1 200 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.068 3.37e-22 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01794 - - aprc:113873604 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01794 09 47345100 47347091 Aip09g01794 09 47345100 47347091 ECH