Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01785 ATGGATGAGGACACAAATGTGGAACCAATGTTTGATTATCACGGCTTCGATGAAGGGTATAACATTGACTCACTTGAAGACATTGGGATGATTGAATTTTGGAACATCAGGGATGAAGATGTATGTCATTTTCACTTTTCTGATGTCAACATTGCATTTGAGTTCTACAATAGATATGCAAGGACAAAAAGCTTTAGTGCTCGGAAGAACAGGACTAGGAAGAGTCATGCGGGCGCACTTAAGTTGAAGAATTTTGTATGTCATCGTGAAGGATTTAAACCACAAAATAATTATGGCATTGGAAACCTTAAGAGAAAACATACACCCGAGACAAGGTGTGGCTGCAGTGCAATGATGGAGATTCGTGTAGATGCACCTAGTGGTCGTTGGTTTATTTCTTATTTTTCTGATAAACACAATCATCCGCTTCTGGATCCTCGGTTGACTGGATTGCTCCCTGGGCATAGATTCATGTTTGAGGCTGATATTGGCCACATGGTTAACATGAAAAAGGGTGGGATTAGTGTTAGGCAGATATATCGGGCATTAGCAAATCAGACAGGTGGCTACGAGTATCTCTCTTTCATGCAAAGGGACATGTACAATAAAATAGCAAAGCAGAGGCGCCAATTACCCGGTGATGCATATGAAGCTTTGAAGTATCTAGAAGATCAAGCAACAAATGACCCTTCTCTCTATTTTAATCATCACATGGATGCCGATGGAACTTTGCGTAATTTATTCTGGTGCGATGGTCTCAGTAGGGCAAACTACTCATTATTTGGCGATGTGCTGGCTTTTGATGCTACCTATAGGAAGAATAAATATATGTGTCCACTGGTGGTATTTTTTGGTGTCAATCATCACAATCAAACAATTATCTCTGCTGCTGCTTTAATTTGTGATGAGGAAAAAGACACATATAGGTGGTTGCTACAACAACTGAAGGTGGCAATGAATGGGAAAGCACCTGTTTCGGTGATCACGGATGGTGATCTATCAATGAAGTTCACCATTGAAAAAGAGTTTCCTAATGCACATCATAGATTATGTGCATGGCATCTGATTCGCAATGCAACAAGTAACATTGGCAAGCCCCTGTTTACCTCCATGTTTAAAAATTGTATGCTAGGTGACTATGAAATTGATGTATTTCGTCAAAAGTGGTTTGAAATGGTTGAGGGATTTGGTATCGAAAACAAGAATTGGGTCCTAGATATGCATAAAAAGAGACATTCATGGGCAACTGCACATATAAGAGGGAAGTTTTTTGCTGGTTTTCGGACTACTTCTCGGTGCGAGGGATTAAACTCGATCATTGCAAAGTATGTCAACTCAAGGTACAATCTTGTTGAGTTCATTCAACACTTTAATCCTTGTGTCGACCATATAAGGTGGAAAGAGGTCCAGGCTGACCTCGCCTCTGTGAATGGGAGACCCAGTATGCAAACTTGTTTTCAACAGTTAAAGAGGAGTGCTGCCAATGTTTACACCCTATCAATATTTCATATGTTCCAACCAATCCTTGTACGGGCTGCATCAATGAAGGTAATAAATATGAGGCAAACTGGCTCTTATGTGATTTACTCTGTCGGTTTGGACCGAATGCCAAATGAGATGTGGCGTGTATTCTGTTGTGACATTGAGATGGAATTCAATTGTTTATGTATGAGAATGGAATCATTTGGCATACCTTGTGAACACATAGTTTGCGTCTTGGTGCATGAAGATATAGAGGAGTTACCAAGGTCATTAGTCTTGCCTCGGTGGACCAAGACTGCCAAAGTAGGTTTGCAAAATGCGGTCGGGCTTCATTGGGATTCTTTGATGCTAAGTCAATACAGTTGTTTGATGGATTGGTTTAGACAACTAGCCAACTTTGCTTGCCGAGATAACGAGAGATTTATCTTTACACGGGAAATGGCTATGAATTTGTTGAAACAATTTAAGGAGGAAGATGCTGCACAAAAAGAGTTGGTCAATGATGCAGATAGTGTAAGAGATGGTGTGCAAGTGGATGCTTTTGGAGCTGGGCTCGCAACCAATGATCTCGGATATAGCATGCCAAGGGACCCAAGAAAATATAGGACAAAAGGGGGGCTTCACAGTCTAATAAAAGAAAACATCGATGTGGACAGTGTGGCTCTGTATGAAGCTCTAATGAGGCAAAAAGAACTGCTAGCTTACATTCACAGCCAAGAAGAAGCTAGGCTAAGGAAGAAGAAGTTCTGCTGGTGA 2238 0.4093 MDEDTNVEPMFDYHGFDEGYNIDSLEDIGMIEFWNIRDEDVCHFHFSDVNIAFEFYNRYARTKSFSARKNRTRKSHAGALKLKNFVCHREGFKPQNNYGIGNLKRKHTPETRCGCSAMMEIRVDAPSGRWFISYFSDKHNHPLLDPRLTGLLPGHRFMFEADIGHMVNMKKGGISVRQIYRALANQTGGYEYLSFMQRDMYNKIAKQRRQLPGDAYEALKYLEDQATNDPSLYFNHHMDADGTLRNLFWCDGLSRANYSLFGDVLAFDATYRKNKYMCPLVVFFGVNHHNQTIISAAALICDEEKDTYRWLLQQLKVAMNGKAPVSVITDGDLSMKFTIEKEFPNAHHRLCAWHLIRNATSNIGKPLFTSMFKNCMLGDYEIDVFRQKWFEMVEGFGIENKNWVLDMHKKRHSWATAHIRGKFFAGFRTTSRCEGLNSIIAKYVNSRYNLVEFIQHFNPCVDHIRWKEVQADLASVNGRPSMQTCFQQLKRSAANVYTLSIFHMFQPILVRAASMKVINMRQTGSYVIYSVGLDRMPNEMWRVFCCDIEMEFNCLCMRMESFGIPCEHIVCVLVHEDIEELPRSLVLPRWTKTAKVGLQNAVGLHWDSLMLSQYSCLMDWFRQLANFACRDNERFIFTREMAMNLLKQFKEEDAAQKELVNDADSVRDGVQVDAFGAGLATNDLGYSMPRDPRKYRTKGGLHSLIKENIDVDSVALYEALMRQKELLAYIHSQEEARLRKKKFCW 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01785 745 Pfam MULE transposase domain 264 358 IPR018289 -
Aip09g01785 745 ProSiteProfiles Zinc finger SWIM-type profile. 529 577 IPR007527 GO:0008270
Aip09g01785 745 SMART 26again6 552 579 IPR006564 GO:0008270
Aip09g01785 745 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 42 617 IPR031052 GO:0006355
Aip09g01785 745 Pfam FAR1 DNA-binding domain 54 144 IPR004330 -
Aip09g01785 745 PANTHER OS02G0262500 PROTEIN 42 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01785 Aip-Chr9 47018260 47021523 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip09g01785 MULE 6.7e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01785 - - ahf:112723376 1377.46