Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01780 ATGGAAAACAAGGAAGAAAATGACCAACCGGATTGTTGTTTATGGGATCCTTGTAAGAAAAGCCATGCCGATAAACGAAAGGGGATGCTATTGTATGATTTGAGGGAATTGGAGATGGAGAAAGAGAAAGAAGATGAGACATCTCCGAGGGGTGTCTTAGAAGCTGGCGTTAAAGACTTAGACTCTGAGTCAGAGCAACAAGCATCTGAATCAAATGCAAGTGGTTCAAGTAATTCAAGCAGAGCACGCTCTCGATGGGGCAAAATTTTCAAATTGTGGAAAATTAGACCAACTAAGAATCACCTACCTTCATTACACACTCTTAGTTTCTCCAAGTTACGATGGAAGAGCAAAAGCACTAAAGAAGATACTACTACTACTCTACATACTGGTTTCTACAACTTCAGGTCTTCTTTGATCACTTTTAGCCTTTCAGAATTACAATATGCAACCAACAATTTTAGCAGCGAAAATTTAATAGGAAGAGGTGGTTTTGCTGAGGTTTATCAGGGTTGTCTTGAAGAAGGGAAACTAATAGCAGTGAAGAAATTGACGAATGGAAGCATAGAAGAAAAGACAGCGGGTTTTCTATCAGAACTTGGTGTGATTGCCCATGTTGATCATCCTAATACTGCCAAGATTATTGGATGCTGTGTCGAACGAGACATGCATCTTCTTGTCTTTTCACTTTCTCCTCTCGGAAGTTTGGGATCTCTTCTTCATGGTCCAAATAAACACAAACTAGATTGGAGTAAAAGATATAAGATTGCTTTGGGAATAGCTGATGGTTTACTCTATCTACATGAGAATTGTCACAGACGGATTATTCATAGAGATATTAAAGCAGAGAATATTTTGCTCACCGAGAATTTTGACCCACAGATTTGTGATTTCGGGCTCGCAAAATGGTTACCAGAACAGTGGACTCACTGCAACGTAACGAAAATTGGAGGCACATTTGGGTATTTTGCACCTGAATATTGCATGCATGGCATAGTAGATGAGAAAACTGATATATTTTCTTTTGGGGTCTTACTTCTGGAGATCATAAGTGGGCGTCCAGCTTTGGATGATATGCAGAAAAGCCTTGTGCTGTGGGCCAAACCTTTGCTTGAAGATAAGAATATTGAAGCACTTGTTGATCCTTCTCTTGATGATGATTATGATAAGGACCAAGTAGGTCATGTTGTTTTCACTGCATCGAAGTGTGTTGATCAGTCTCCTATTTTAAGGCCTTGCATGAGTGAGGTTGTGACACTACTAAGAGGTCACGATAAGTGTGACTTAGAATCTACAAGAAAAGGTCAAAGAAAGTCGCTTCAGAGAACATACTCAGAAGAGCTACTAGATGCACAAGAATACAACTCAACAAAATATCTTAGAGATCTCAATCGACATAGACAACTTGCCTTGGGTTCTTGTGAATCTTGA 1431 0.3948 MENKEENDQPDCCLWDPCKKSHADKRKGMLLYDLRELEMEKEKEDETSPRGVLEAGVKDLDSESEQQASESNASGSSNSSRARSRWGKIFKLWKIRPTKNHLPSLHTLSFSKLRWKSKSTKEDTTTTLHTGFYNFRSSLITFSLSELQYATNNFSSENLIGRGGFAEVYQGCLEEGKLIAVKKLTNGSIEEKTAGFLSELGVIAHVDHPNTAKIIGCCVERDMHLLVFSLSPLGSLGSLLHGPNKHKLDWSKRYKIALGIADGLLYLHENCHRRIIHRDIKAENILLTENFDPQICDFGLAKWLPEQWTHCNVTKIGGTFGYFAPEYCMHGIVDEKTDIFSFGVLLLEIISGRPALDDMQKSLVLWAKPLLEDKNIEALVDPSLDDDYDKDQVGHVVFTASKCVDQSPILRPCMSEVVTLLRGHDKCDLESTRKGQRKSLQRTYSEELLDAQEYNSTKYLRDLNRHRQLALGSCES 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01780 476 MobiDBLite consensus disorder prediction 66 81 - -
Aip09g01780 476 MobiDBLite consensus disorder prediction 39 65 - -
Aip09g01780 476 Pfam Protein tyrosine and serine/threonine kinase 157 366 IPR001245 GO:0004672|GO:0006468
Aip09g01780 476 ProSitePatterns Protein kinases ATP-binding region signature. 160 183 IPR017441 GO:0005524
Aip09g01780 476 Gene3D Phosphorylase Kinase; domain 1 114 229 - -
Aip09g01780 476 PANTHER OS08G0249100 PROTEIN 31 468 - -
Aip09g01780 476 MobiDBLite consensus disorder prediction 1 20 - -
Aip09g01780 476 ProSiteProfiles Protein kinase domain profile. 154 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g01780 476 SMART serkin_6 154 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g01780 476 MobiDBLite consensus disorder prediction 39 81 - -
Aip09g01780 476 Gene3D Transferase(Phosphotransferase) domain 1 232 446 - -
Aip09g01780 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672|GO:0006468
Aip09g01780 476 SUPERFAMILY Protein kinase-like (PK-like) 134 421 IPR011009 -
Aip09g01780 476 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-PROTEIN KINASE RBK2 31 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01780 Aip-Chr9 46316632 46329931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01780 132 430 Receptor kinase-like Gene Family AT1G53420 43.607 1.57e-75 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Aip09g01780 PK_Tyr_Ser-Thr 3.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01780 - - aip:107615479 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00988 06 14099150 14104645 Aip09g01780 09 46316632 46329931 ECH
Aip06g00262 06 3061699 3063751 Aip09g01780 09 46316632 46329931 ECH
Aip02g02858 02 104747761 104752240 Aip09g01780 09 46316632 46329931 ECH
Aip01g02745 01 128843413 128846134 Aip09g01780 09 46316632 46329931 ECH
Aip04g00388 04 4666397 4669283 Aip09g01780 09 46316632 46329931 ECH
Aip09g01780 09 46316632 46329931 Aip09g01780 09 46316632 46329931 ECH
Aip06g00988 06 14099150 14104645 Aip09g01780 09 46316632 46329931 PCT