Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01762 ATGGTCCGGTTGGGGAGCCCTGCTATGCCGAATATGGATGTCAAAGCTGAAGAGAGTGGTTGGCACAAGGAAGATGAAATCCTTGATGACAGTTGGGTTCAGCAAAGTAGAAAGAAAGGGCCAGCTACCTCACATCTCGATGGATTGAATTGGGAGGTGCTTGTTGTCAATGAGTCGGATGTCAATGCCTTTTGGCTACCTGGTGGTGAGATTGTTGTATACACCGGATTTTTAGAGCATTTTAAAAGTGATGCTGAGATTGCCACTATAATTAGACATGAGGTTGGTCATGCTTTGGCCCGACACACCACTGAATATATGACGAAGAACTTGTGGAAGATGGTGGGCAAGCAAAGTGTTTCCTCTGACCCCCTGAGCTGGGGCCTAGCAGCGGATTCACTCCAGGGCAGCCACTTTCATGAGGTATTGGAGGCAAGAGCTGGGTTCTATGAAAAGCCAATTGCTACAATAGATTTTGCATCACTATATCCATTTATTATGATGGCCTATAATTTATGTTATTGTACCCTGGTGACTCCTGAAGATGTTCGGAAACTTAATCTCCCTCCAGAATCAGTGAACAAAACTCCATCTGGGGAAACATTTGTTAAATCAAATTTGCAGAAGGTCTGTTGCTTTTAA 642 0.4424 MVRLGSPAMPNMDVKAEESGWHKEDEILDDSWVQQSRKKGPATSHLDGLNWEVLVVNESDVNAFWLPGGEIVVYTGFLEHFKSDAEIATIIRHEVGHALARHTTEYMTKNLWKMVGKQSVSSDPLSWGLAADSLQGSHFHEVLEARAGFYEKPIATIDFASLYPFIMMAYNLCYCTLVTPEDVRKLNLPPESVNKTPSGETFVKSNLQKVCCF 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01762 213 SUPERFAMILY DNA/RNA polymerases 142 194 IPR043502 -
Aip09g01762 213 Gene3D Metalloproteases ("zincins"), catalytic domain 28 108 - -
Aip09g01762 213 PANTHER METALLOENDOPEPTIDASE OMA1 36 114 - -
Aip09g01762 213 Gene3D Palm domain of DNA polymerase 142 211 IPR023211 -
Aip09g01762 213 Pfam Peptidase family M48 32 109 IPR001915 GO:0004222|GO:0006508
Aip09g01762 213 MobiDBLite consensus disorder prediction 1 21 - -
Aip09g01762 213 PANTHER METALLOENDOPEPTIDASE OMA1, MITOCHONDRIAL 36 114 - -
Aip09g01762 213 Pfam DNA polymerase family B 141 208 IPR006134 GO:0000166|GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01762 Aip-Chr9 45283028 45287223 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01762 86 209 Core DNA Replication Machinery Family AT5G63960 57.600 1.09e-36 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01762 K23010 - adu:107495268 184.882