Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01752 ATGGCGCTAAAAGCAGTGGTGTATCCACAAAGCCAAGACCCATCATTTGGCTATGGAGTCAATTACAACAACTGCTACCGAAACTGGAGTAACAGCTACAATAATGAAGACCAAAGAGTAGAAACAACTTACCCTGCAGAAATATGGAACAATAACAATACTACTTGTTCATCACCGCCATCAGTGTTGCCATCGTCGTGTCGGCCGAAGAGGCGAAGAGCGAAGAGCAGGAAGAACAAAGAGCAGATAGAGAACCAGAGAATGACTCACATTGCAGTGGAGCGCAACAGAAGGAAGCAGATGAATCACTATCTCTCCCTTCTCCGCTCTTTAATGCCGGACTCTTATGTTCAAAGGGGGGATCAAGCATCAATAATAGGAGGAGCTATTAACTTTGTTAAGGAGCTTGAACAGAAGCTGCAGTTCCTTGGAGCTACATATCAAGAAGGTGAAGATGGGAATAATAAGAAGAAGAAGAACATGGCCTTTTGTGAATTCTTCACATTCCCACAGTACACAAGAACAGCAACAGCAACAGCAACAACATCAAGCAGCAGTAGTAACAGTGAGAAATCATCATCATCAAGAACAGTGGCGGCAGAGGAGGAGTTGGGGGAGGTAGCTGCAGACATAGAAGTGACAATGGTGGAGAGCCATGCAAATGTGAAGATAAGGTCAAAGAAGAAGCCAAAGCAGCTGTTGAAGATGGTGTCTGCTTTGCACAACATGAGGCTTACAATCTTGCACCTTAATGTCACCACCACCATCAATCAACTTGTTCTCTACTCTCTCAGTCTTAAGGTGGAAGATGATTGCAAGTTGGGATCGGTGGATGATATTGCTGCAGCTGTATACCAGCTTATGAATACCATTCAACAAGAGGCACCAATAATCTTAGCTTCAACTAATTAA 912 0.4375 MALKAVVYPQSQDPSFGYGVNYNNCYRNWSNSYNNEDQRVETTYPAEIWNNNNTTCSSPPSVLPSSCRPKRRRAKSRKNKEQIENQRMTHIAVERNRRKQMNHYLSLLRSLMPDSYVQRGDQASIIGGAINFVKELEQKLQFLGATYQEGEDGNNKKKKNMAFCEFFTFPQYTRTATATATTSSSSSNSEKSSSSRTVAAEEELGEVAADIEVTMVESHANVKIRSKKKPKQLLKMVSALHNMRLTILHLNVTTTINQLVLYSLSLKVEDDCKLGSVDDIAAAVYQLMNTIQQEAPIILASTN 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01752 303 PANTHER HELIX-LOOP-HELIX-LIKE PROTEIN 23 295 - -
Aip09g01752 303 SMART finulus 91 142 IPR011598 GO:0046983
Aip09g01752 303 Gene3D - 70 153 IPR036638 GO:0046983
Aip09g01752 303 MobiDBLite consensus disorder prediction 178 199 - -
Aip09g01752 303 Pfam Helix-loop-helix DNA-binding domain 86 137 IPR011598 GO:0046983
Aip09g01752 303 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 85 136 IPR011598 GO:0046983
Aip09g01752 303 PANTHER MAX DIMERIZATION, MAD 23 295 - -
Aip09g01752 303 MobiDBLite consensus disorder prediction 55 82 - -
Aip09g01752 303 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 85 149 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01752 Aip-Chr9 44074553 44076973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01752 1 268 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 43.810 1.66e-65 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aip09g01752 HLH 7.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01752 - - adu:107465443 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00978 06 13891413 13892941 Aip09g01752 09 44074553 44076973 PCT