Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01751 ATGCTACAGGTCTCATTTCCAGCGATAAAGAATATTCTTCTTTTGGATTCTGAGGGAAAGCTTGTGGCAGTCAAATATTTTTCAAATGACTGGCCAATAAACAATGCGAAGCTTGCTTTTGAGAAGTTTGTCTTCACTAAGACCGTTAAGACCAATGTTCCTAGGTTGCTGGTCATCAAGGGGAAGGAGAAAGAGGTGTGGCAGTGGCAAGCAACAAGGATCATCATCATGGTTGTGATCAACCTCATTGCTGCTGGTCATCAAGGGGAAGGAGAAGGAGGTGTGGCAGTGTCAAGCAATAAAGATCATCATCATAGTCTAGGATTTGGCAGTCGTGGTCTTGCTGTACTCATTCCTCTTATTTCACCTAATTCTTCCAAAGGAGGAGGGCAGGCTGAGAAAATGAAAGCTTCCAAGAAGCAATGCACAAATGAGAGTAAAATGCCAAAATCCAACAAGTCAGAAGCATCTAAGGATCCTCAAAGTGTTGCTGCTAAGAATAGAAAAGAGGGGATAAGTGAGAGGCTCAATATACTACAAGAACTAGTTCCCAATGGCTCCAAAGTTGATTTGGTTATAATGCTGGAGAAAGCAATTAGCTATGTGAAGTTTCTTCAGCTTCAAGTGAAGGTGTTAGCAGCTAATGAATTTTTGCCTGTTCAAGGTGGAAAAGTTCCTGATATCTCTCAGGCAAAAGAAGCCATTCATGCCATTCTTTCATCCCAAAGATTAGAGAAACAAGTTCAACAACCTCAAAGTAGATGA 765 0.4131 MLQVSFPAIKNILLLDSEGKLVAVKYFSNDWPINNAKLAFEKFVFTKTVKTNVPRLLVIKGKEKEVWQWQATRIIIMVVINLIAAGHQGEGEGGVAVSSNKDHHHSLGFGSRGLAVLIPLISPNSSKGGGQAEKMKASKKQCTNESKMPKSNKSEASKDPQSVAAKNRKEGISERLNILQELVPNGSKVDLVIMLEKAISYVKFLQLQVKVLAANEFLPVQGGKVPDISQAKEAIHAILSSQRLEKQVQQPQSR 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01751 254 MobiDBLite consensus disorder prediction 144 161 - -
Aip09g01751 254 PANTHER BHLH TRANSCRIPTION FACTOR 131 244 - -
Aip09g01751 254 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 131 244 - -
Aip09g01751 254 CDD bHLH_AtIND_like 157 219 - -
Aip09g01751 254 Pfam Helix-loop-helix DNA-binding domain 166 206 IPR011598 GO:0046983
Aip09g01751 254 Gene3D - 2 86 - -
Aip09g01751 254 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 156 205 IPR011598 GO:0046983
Aip09g01751 254 MobiDBLite consensus disorder prediction 125 167 - -
Aip09g01751 254 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 153 214 IPR036638 GO:0046983
Aip09g01751 254 SMART finulus 162 211 IPR011598 GO:0046983
Aip09g01751 254 Gene3D - 149 213 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01751 Aip-Chr9 43805730 43809967 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01751 121 246 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G66470 60.938 1.28e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01751 - - aip:107615496 327.405