Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01746 ATGGTGACTCCCTTGGCGCTCACCGTCTGTCACGGAGGGAGCCCGAAGCTGTCACGAAGGGAGCGTTGGAACTTCTCCCGAAAGAGAAGGATTCAGAAGGCGGCGAAGGTGGAAATGAACAAGGACAACAAGGGATGGCGTCAGAGGGAGAAGAACGAGCTAGCGAATCGCCTTGCAAAACTGAGACAATCACTTTGCTCTGCCGTTCCGATCTCATCGCCTTCCTTCGGTTGCTTCATTCAGGACATGCCTAATGGATACTCCAAGGTGACTTGGGTTGAACATGTAGAGATCAAAGACAAAACTCCGGTTCATTGTCTTTTCCAGAATCTTGTTTATAATGGAATGGCATTTGGAGCTCAGAAATGGCTTGCCGTGCTGCAGAGGATGTGTGAAAGATTGGCTTGTTTAACGGTAACAGGAAATTCCACCAGGGATCTTGGAAGAGAAGGGAGTGGTGTTCTTCTCTTAGGAGTGGGACTTAAATGCCCTCTCATCAAAGAAAGGCTCTCCTTATTTACTCCTGCTGCTGTTGCTACTGGTGTGGAATGTGCAGATATTGCTGGGACTCCTCCTTATGGATATTGCCAGAGTGCTGTTTCTGGGCTGAATAGAGGTCTTGCTACAAATGAGGATAATTTGAGAAAGGAGGATGCTGTGGCTAAGGAACTCGAAGCTGCCGGAGGACTAGTTGATCTCTCGGCTGACCTCGATAAATTGCAAGGAAGATGGAGACTGATATATAGCAGTGCATTCTCATCTCGTACTCTAGGCGGCAGCCGGCCTAGACCTCCCACCGGAAGACTCCTTCCTGTAACTCTTGGACAGAATGATTTGGTTTGTCATCAGCACTTTGTTCAGCAATTAGATCATGATCAGTGTCACTTCCATCTTGTGTTTGGGATAGTTATTTTGTTCCATTATGCAGTGACAGAAGTTCCTGATAATGTTTTCCTTCTAGAAGGATGCCCTCATGACTGGTTGTTTCCTCAATGTTCCGCCATGGTGCATCATGGTGGAGCTAGAACCACTGCTACAGGACTAAAAGCCGGGGTAATGTTCAATATTGTAGCAACCGTCAAAAGAAGTTCCAAATTGCGGTGTCTAGAAGAGATTCTTTGTCCTTTTCTTGTCTTCCTTCATTCAATGCTATTCAGAAAACAGTTCCTTTGGCTGCTTCAATTGCAATTCTTCTCTGGTCCCCCCTGCAACGAGAGCAGCAATGCTTGTGAGGGTCAACACCCTTCTTCAAGGGTACTCTAG 1263 0.4687 MVTPLALTVCHGGSPKLSRRERWNFSRKRRIQKAAKVEMNKDNKGWRQREKNELANRLAKLRQSLCSAVPISSPSFGCFIQDMPNGYSKVTWVEHVEIKDKTPVHCLFQNLVYNGMAFGAQKWLAVLQRMCERLACLTVTGNSTRDLGREGSGVLLLGVGLKCPLIKERLSLFTPAAVATGVECADIAGTPPYGYCQSAVSGLNRGLATNEDNLRKEDAVAKELEAAGGLVDLSADLDKLQGRWRLIYSSAFSSRTLGGSRPRPPTGRLLPVTLGQNDLVCHQHFVQQLDHDQCHFHLVFGIVILFHYAVTEVPDNVFLLEGCPHDWLFPQCSAMVHHGGARTTATGLKAGVMFNIVATVKRSSKLRCLEEILCPFLVFLHSMLFRKQFLWLLQLQFFSGPPCNESSNACEGQHPSSRVL 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01746 420 ProSiteProfiles START domain profile. 77 136 IPR002913 GO:0008289
Aip09g01746 420 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 309 352 - -
Aip09g01746 420 PANTHER PLASTID-LIPID-ASSOCIATED PROTEIN 6, CHLOROPLASTIC 198 276 - -
Aip09g01746 420 Pfam START domain 77 133 IPR002913 GO:0008289
Aip09g01746 420 Gene3D Glycogen Phosphorylase B; 310 352 - -
Aip09g01746 420 Coils Coil 207 227 - -
Aip09g01746 420 SUPERFAMILY Bet v1-like 75 133 - -
Aip09g01746 420 PANTHER - 198 276 IPR039633 -
Aip09g01746 420 Pfam PAP_fibrillin 198 275 IPR006843 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01746 Aip-Chr9 43361857 43365391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01746 77 156 Homeobox Transcription Factor Family AT1G73360 58.750 4.97e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01746 - - qsu:112036149 141.354