Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01700 ATGAGAAATGCTCAGCAAGTTCTCCGTCATGTCAATGTCTCTCTCCATGACGGAAGTGCGCTAGTCCTAACTGGTGCAAATGGCTCTGGCAAGACCACCTTCCTCCGCATGCTAGCTGGATTTTCCCGTCCCTCAGCCGGTGAAATTCTCTGGAATGGACACAACATACAAGATTCTGGAATCTTCCACCAGTACAAGCTCCAGCTCAACTGGCTCTCCCTCAAGGATGCAATCACTGATCGGTCCACGGTTCTCGAAAATGTTGAGTGGTTTGAGCTTCTTGAAGGAAAGTATGGCAGGGCTTTACCTGCGCTTGAGTTGATGGGGCTGGGCAGATTGGCCAAGGAGAAGCCAAGGATGCTATCCATGGGGCAGCGGAAAAGAGTGCAACTTGCAAGGTTGATTGCTCTCGATCGACCCATATGGTTGCTTGATGAGCCTTCCGTTGCGTTGGATGATGAAGGGGTGAAGTTACTTGAGTACATCATCTCGGAACATCGGAAAAATGGAGGGATTGTGATTGTGGCTACTCATTTACCTATTGAAATACATGATTCCATGTTGTTGCGGCTCCCACCCAGGTTTCCAAGGAGGATGACCTTCTTTGATATGCTTGATCGCTCCGATATTATGTAA 636 0.4858 MRNAQQVLRHVNVSLHDGSALVLTGANGSGKTTFLRMLAGFSRPSAGEILWNGHNIQDSGIFHQYKLQLNWLSLKDAITDRSTVLENVEWFELLEGKYGRALPALELMGLGRLAKEKPRMLSMGQRKRVQLARLIALDRPIWLLDEPSVALDDEGVKLLEYIISEHRKNGGIVIVATHLPIEIHDSMLLRLPPRFPRRMTFFDMLDRSDIM 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01700 211 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 210 IPR003439 GO:0005524
Aip09g01700 211 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 1 205 IPR005895 GO:0017004|GO:0022857
Aip09g01700 211 TIGRFAM ccmA: heme ABC exporter, ATP-binding protein CcmA 2 190 IPR005895 GO:0017004|GO:0022857
Aip09g01700 211 Gene3D - 1 189 IPR027417 -
Aip09g01700 211 Pfam ABC transporter 8 148 IPR003439 GO:0005524
Aip09g01700 211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 180 IPR027417 -
Aip09g01700 211 SMART AAA_5 17 205 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01700 Aip-Chr9 40280125 40280760 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01700 6 179 Calmodulin-binding Proteins AT2G36910 24.742 1.51e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01700 - - lja:Lj0g3v0105229.1 365.155