Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01678 ATGCCTAATGTATCTAGAGCAAAAAACTGGACACTTGATGAATTTTATTCCTCAGTTTCCCAAAAGCAAAACTCACACTTAGTGAAATTTTTGTCCCTCCAAAACTCACACTTAGCCTTCATCTCAACCCCCTTTCAGACACCCTGTCACCATCGAAGAAACCCTTCAAACCTCACCATCGCGAAGAAACCCTCTCGCTATAGAAACCCTCTCACTCACCACTCACCGTCGCTCCTCTTCACCCTCCTCCTCGTCGCTGCGCCGCCCTCACCATCGTCATCTCTGCGCTTCTCATCGTCCTTCCCCTTTCAATTCGATCGACTAACCCTCATCTATGTGCTATATACTGAGCTTAATGAATATTTTTTCTTTGATTCATCACCAATTCACGCTACCTGCACAAACTCGTGCGCCTTCTCCTTCGATTTGTCACCGCTGCTCATCTCTTCTTCAAGGGTTTTCACCTTCGATTCGTGGTCACTCATCTCTTCTTCACCGTTGCCATTCATCACCGCGCTCACCAATGTCAAAGAAACTGTGTGCTCTCTAGCGACCTCTTCTCCGCTCTACTGTGAAGCATCAAGGTTTCCAATGAGGCAAAGCATCGATCCCTTACAATCGAGTCGTGCAATTGAGTTGAAGAATCATTCATTACTACATGGAAAAGTGATAAGGGTCATGTGGTCTCGTCGCGATCCTGATGTGAGAAAAAGTGGCAGAGGAAATGTTTTTGTTAAGCAGAACTTAGCTGAATCCATAGATAATGCAGGATTACATGATTTATTTCAAAAGTTTGGAAATATCTTGTCCAGCTTTGGAAATTGCTTTGGTGCTTCAAATTGGTTTAGAGGGAGTGATGATAGTGATACTGCTGAGAAGCCACGGGAACGAGGAATCACCTCCAGAATGCTCTTTGGACAGTTGATTCTGGCGGCTGCAGGTGTAGCTAAAGATCGCAAGTGCACCGCTTTTCCTCTTGTTAAACCGGCATTGGTTGCCTCCGGTACTCATTGGGTTGAACCAGACACCATGGCAGCAAAAGATGGTAATCTCATTACTGCCGCCACTTATGAAGGGCACCTTGAATTTATTCAGCACTTTATGAAGGCACTAGGAGGCAACATAAGTGGCTCCAACAAAAAATAA 1146 0.4511 MPNVSRAKNWTLDEFYSSVSQKQNSHLVKFLSLQNSHLAFISTPFQTPCHHRRNPSNLTIAKKPSRYRNPLTHHSPSLLFTLLLVAAPPSPSSSLRFSSSFPFQFDRLTLIYVLYTELNEYFFFDSSPIHATCTNSCAFSFDLSPLLISSSRVFTFDSWSLISSSPLPFITALTNVKETVCSLATSSPLYCEASRFPMRQSIDPLQSSRAIELKNHSLLHGKVIRVMWSRRDPDVRKSGRGNVFVKQNLAESIDNAGLHDLFQKFGNILSSFGNCFGASNWFRGSDDSDTAEKPRERGITSRMLFGQLILAAAGVAKDRKCTAFPLVKPALVASGTHWVEPDTMAAKDGNLITAATYEGHLEFIQHFMKALGGNISGSNKK 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01678 381 PANTHER DJ-1 PROTEIN 303 381 IPR006286 -
Aip09g01678 381 SUPERFAMILY Class I glutamine amidotransferase-like 306 373 IPR029062 -
Aip09g01678 381 PANTHER DJ-1/THIJ/PFPI FAMILY PROTEIN 303 381 - -
Aip09g01678 381 Gene3D - 230 301 IPR012677 -
Aip09g01678 381 Pfam DJ-1/PfpI family 306 369 IPR002818 -
Aip09g01678 381 Gene3D - 302 377 IPR029062 -
Aip09g01678 381 SUPERFAMILY RNA-binding domain, RBD 208 274 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01678 Aip-Chr9 39642347 39646193 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01678 172 270 Eukaryotic Initiation Factors Gene Family AT2G36660 52.000 1.41e-19 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01678 K18881 - aip:107615723 281.952