Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01657 ATGGGGGGCTCTGAGGCTCTTAGCATGTTGTTCTTCATCATCACCACCTTCTTGATGATGATTCTGCTATCATCATTGCAGCAAAGTACCCACATTATTTTTACTGTGGATTCTTTGTGGAATAGTTATGATGTTCATGACATGTATTTCATTGACGAGAGCAGCATTCAACAAGGGAACAACATCAATGATGGAAACAGCAAGAAGAATGTTGAGAAAATCTCAGGTTTGGATGAGAATGAAGAGAAGCAAGCCATGTTTGTTGAAACATTCAGAACATTGCTTGGACTCAAAAGCTTCCACGAAAAAGTACCTTCTTCATCTTCTTCTTCTGAGTTATTATTCTCATTCTCATTCTCTCCTTCACCTTCTCCATCACCAACAAGCATTGAACCTGAGGCTGTAGCTCCATTATCTCCAGCACCTTCTCCTGTGGTTCACAACCATCCTCACCATCATCATCATCATCATCATCATTATTATCATTCTCATTGGAATCTGAAGAAAGAAGCTCATCATCATCATGAAGAAGATAGAGGCAGAGCTAAGAAAATACTAGTAGCAATTCTTGTTTCTGTGGGAATTGCTACATTAATTTGTGGTTGTGCCTTAATCTTCTTCTGCAGGAAATTCAGGAACCAAAGGAAGAAACCAAAAAGGACCATGCCACTCTGTAGCAGCAAGAAAAAGAACAAAAACAAGGTGAGTTTAAACTCAAGGCTAGATCTGTTTTATCTTGATTCCTTAGGTGAAGATTTAGAACAACAACAACAAGAAGAAGCAGAAGCTTGCACCTTGAAAGAAATTAGTTATCAGAATAATCCTACTGAAGAATGTGACAATGTTAGTAGTTCTTCCACAAAGGAGATTCTACCTGTTCATGACGAAGAGGAAGAAGATATTGAATCTGAATCTGAATCTGGTGGAAGAGAAATTGGAATCTCTGCTGACCCTGAAGAAGAAGAAGAAGAAGAAGAGAATCATTCGTCAGAGAATGAAAGTTTTCATTCCATTATTAATTCACAAACAAATTCAAGACTCTCTAATGCTTCATCTTCTAGCCTTGTTAGTGAAACATTGATGTCACCAAAGGATTCATCACCATTACCAAACCAATTTCTTAGTTCACCAAATAACTCAATTTCAAACCCTAAACCACCGCCACTTACTCCAAAACATGAAAATCAAGAAACTGATGAGACTATTAACCAATTTGTCAAACCCTCTACATCTCCACCGCCTCCCCCGCCACCGCCGCCGCCACCAACTCCGCCTCTTCAAATGCCACTCTTCAGATTACATTCTCTCACTTCTTCATCCAGAGCTTCCTCTCCCTCTCCGCTTTCTTTAAAATCTCATAACTTCTCATCACCATCTCCAAGAAACTCAGACTCAAATCAAAGTCCTCAAACAGAGTTGCCTTCTCCGCCGCCGCCGCAACCGGCGAAATCTCCAGGCAACAACAACATTCCACCACCGCCATGTCCACCACCGCCATTTCCAAAGGGCAATGTGAAAACACCACCTCCTCCACCATCTCAACTACCTCAATTCACGGCACTAGGCAAAGATGGAGCACCGCTTCCAAAACTGAAACCGCTTCATTGGGACAAAGTAAGAGCCGCACCAAATCGCACTATGGTTTGGGATAAACTAAGATCAAGCTCCTTTGAGTTGGATGAGGAAATGATTGAGTCACTTTTTGGATACAATTTACAGAGTTCTATCAAGAATGAGGAAACAAAGAGCAAAAGCCCTTCTCCAAGCAAGCATGTTCTTGAGCCTAAACGGCTTCAGAACATTACGATACTCTCAAAAGCTATAAATGCAACAGCTGAGAATGTATGTGAAGCCTTAATACAAGGTAAGGGCCTTTCTTTGCAACAACTAGAGGCATTGGTGAAAATGGTGCCCACAAAGGAAGAGGAGGCCAAGCTTGCCAACTATAAAGGCGACATCAATGAACTGGGGTCCGCAGAGAGGTTTGTGAGGGCAATGCTTCAAGTTCCATTTGCCTTTCAAAGGGTAGAAGGCATGCTTTACAAGGAGACTTTTGAAGATGAAGTTGTTCACCTAAGGAACTCTTTTTCAATGCTAGAGGAGGCATGCAAGGAACTAAGATCAAGCAGGTTGTTCTCGAAGTTACTAGAAACCGTGCTGAAGACAGGGAACCGCATGAATGTGGGGACGATCCGCGGCGGGGCAAGAGCATTCAAGCTCGACGCCCTTCTCAAGCTAGCAGACGTCAAAGGCATTGATGGCAAAACCACGCTGCTCCACTTTGTGGTTCAAGAAATCATCCGATCCGAAGGGATTCGAGTTTCAGACAGCATCATGGGAAAAATAAGCCAAAAGAACAACAAAAACAGGACCGAAGAACAAAAGGAAGAGGACTACCGAAGAATGGGACTTGAATTAGTCTCTGGCCTAAGCACGGAGCTCTACAATGTGAAGAAAACCGCTACCATCGACTTAGATGTTCTTGCAAGCTCTGTGTCAAATCTATCTGAAGAAATGGCAAAGCTAAAACAACTCGTGGGGAAGGATTTGCATAATGATGGAGAGAGCAGTGAGGGGTTTGTTAACACTATGATGTGCTTCTTGAGTTATGCTGAGAAGAAGCTGAAGGAGTTGGAAGGAGATGAGAACAGAGTGTTGTCACGTGTGAAGGAGATAACTGAGTATTTTCATGGTGATGTCAGCAATAAAGAAGATCAAAACCCACTTAGGATCTTTGTTATAGTGAGGGATTTCTTGGGGATGTTGGATAGCGTGTGTAAAGAGCTTAGAAGGAATAAATCTACTCGTAGCCCAAACCCTCTTGCACCATTTAGATAG 2838 0.4232 MGGSEALSMLFFIITTFLMMILLSSLQQSTHIIFTVDSLWNSYDVHDMYFIDESSIQQGNNINDGNSKKNVEKISGLDENEEKQAMFVETFRTLLGLKSFHEKVPSSSSSSELLFSFSFSPSPSPSPTSIEPEAVAPLSPAPSPVVHNHPHHHHHHHHHYYHSHWNLKKEAHHHHEEDRGRAKKILVAILVSVGIATLICGCALIFFCRKFRNQRKKPKRTMPLCSSKKKNKNKVSLNSRLDLFYLDSLGEDLEQQQQEEAEACTLKEISYQNNPTEECDNVSSSSTKEILPVHDEEEEDIESESESGGREIGISADPEEEEEEEENHSSENESFHSIINSQTNSRLSNASSSSLVSETLMSPKDSSPLPNQFLSSPNNSISNPKPPPLTPKHENQETDETINQFVKPSTSPPPPPPPPPPPTPPLQMPLFRLHSLTSSSRASSPSPLSLKSHNFSSPSPRNSDSNQSPQTELPSPPPPQPAKSPGNNNIPPPPCPPPPFPKGNVKTPPPPPSQLPQFTALGKDGAPLPKLKPLHWDKVRAAPNRTMVWDKLRSSSFELDEEMIESLFGYNLQSSIKNEETKSKSPSPSKHVLEPKRLQNITILSKAINATAENVCEALIQGKGLSLQQLEALVKMVPTKEEEAKLANYKGDINELGSAERFVRAMLQVPFAFQRVEGMLYKETFEDEVVHLRNSFSMLEEACKELRSSRLFSKLLETVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGIDGKTTLLHFVVQEIIRSEGIRVSDSIMGKISQKNNKNRTEEQKEEDYRRMGLELVSGLSTELYNVKKTATIDLDVLASSVSNLSEEMAKLKQLVGKDLHNDGESSEGFVNTMMCFLSYAEKKLKELEGDENRVLSRVKEITEYFHGDVSNKEDQNPLRIFVIVRDFLGMLDSVCKELRRNKSTRSPNPLAPFR 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01657 945 Coils Coil 825 845 - -
Aip09g01657 945 PRINTS Proline rich extensin signature 376 388 - -
Aip09g01657 945 PRINTS Proline rich extensin signature 413 425 - -
Aip09g01657 945 PRINTS Proline rich extensin signature 466 483 - -
Aip09g01657 945 PRINTS Proline rich extensin signature 492 517 - -
Aip09g01657 945 MobiDBLite consensus disorder prediction 126 163 - -
Aip09g01657 945 SUPERFAMILY Formin homology 2 domain (FH2 domain) 534 933 - -
Aip09g01657 945 MobiDBLite consensus disorder prediction 275 289 - -
Aip09g01657 945 PANTHER FORMIN-RELATED 404 945 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aip09g01657 945 PANTHER FORMIN-RELATED 62 418 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aip09g01657 945 SMART it6_source 521 937 IPR015425 -
Aip09g01657 945 MobiDBLite consensus disorder prediction 147 163 - -
Aip09g01657 945 MobiDBLite consensus disorder prediction 408 428 - -
Aip09g01657 945 MobiDBLite consensus disorder prediction 275 530 - -
Aip09g01657 945 Pfam Formin Homology 2 Domain 525 922 IPR015425 -
Aip09g01657 945 MobiDBLite consensus disorder prediction 471 516 - -
Aip09g01657 945 MobiDBLite consensus disorder prediction 333 380 - -
Aip09g01657 945 MobiDBLite consensus disorder prediction 432 470 - -
Aip09g01657 945 Gene3D Formin, FH2 domain 544 939 IPR042201 -
Aip09g01657 945 PANTHER FORMIN-LIKE PROTEIN 404 945 - -
Aip09g01657 945 PANTHER FORMIN-LIKE PROTEIN 62 418 - -
Aip09g01657 945 ProSiteProfiles Formin homology-2 (FH2) domain profile. 521 945 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01657 Aip-Chr9 37435931 37443743 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01657 503 945 FH2 protein (formin) Gene Family AT3G05470 73.933 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01657 - - aip:107618869 1535.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01657 09 37435931 37443743 Aip09g01657 09 37435931 37443743 ECH