Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01650 ATGGGTCTTGGGATGAAATATGACGAAGAAAGCAAGGTGGTTGACGATGGAGGAGAGGGTGGCGGTGGTGGAGCTAATTCGTTTGATTCTGTCTCATGTTCAATTTGCCTTGACGCTGTTATCGATAATGGGGATCGATCGTTGGCTAAGCTTAAATGTGGCCATCAATTTCATCTTGATTGCATTGGTTCAGCATTCAATATGAAAGGAACAATGCAATGCCCTAATTGTCGAAAGATTGAGAAAGGTCAATGGCTTTATGCTAATGGTGGCCGGTCATATCATGATTACAGTATGGATGATTGGACCCATGATGAGGACCTTTATGACCTTAGCTACTCTGAAATGTCCTTTGGAGTTCATTGGTGCCCATTTGGCAACTTGGCGAGACTTCCATCATCTTTCGAGGACGGAGAATTTTCATCAAGTGCATATCATGATATACTGGGAGGACAACATGCTGTATATGCTGAGCATCATAACACAGTTGTAAATTCTGTTAATCATCCTTGCCCATATATTGCATATTTTGGAGCAATACATCCATCTTCCTCCAACTCAGGTGGAAATGTTTCAGAGATTTCCACCTTCAGTCATTGGAATGGTTCATCTGTGCATAGCGACATGCCCACTTCCTACACATATCCTACATTGGATCTTCATTATCATAGTTGGGAACAACATTCCCCTCCTTTCTCTACATACACTAGTCGTCTAGTTGCCGGTGATCGCCGGTCGATATCTCCACGGACTCAAAGGCCATCCAGGGGTGGCTCAGATGTACCAAGATCAAGTTCTTATATGCATCCTCCTGGGGGTCACAGTTCTTCTGGTTCTGTGAGCTCAGTTACTTCCTCAATGCTACCTCCTTATCCTGGTAGCAACGCTCGATCCCGTGATAGAGTTCAAGCGCTTCAAGCTTACTATCAATCACCAAATTCAACTACAACGCGAACACACGTTCCTTCTGGATCCCGAAGATCTGGTAATCATAGTGGATCACCTCAAATTGCACCGGACCAAAGCGGTTTCTTTTTTGTCCCATCAAGTTCTTCAGGTCGTAGTAGTTTTCCAGAAGATGCATGTCTCCCAAGTCGCTACCATGCTTGGGAACGAGAGCACATATCTTCTTTAAGCATTGTTGATAGAGATTCAGCCTGGAGACAATACCGCCAAACTGTTGGTAGGTCAGAACGCTCTAGCAACTATCGATTAAGGCATGGATCCGAAAGAATGCATTCCCATAATCGATGA 1254 0.4426 MGLGMKYDEESKVVDDGGEGGGGGANSFDSVSCSICLDAVIDNGDRSLAKLKCGHQFHLDCIGSAFNMKGTMQCPNCRKIEKGQWLYANGGRSYHDYSMDDWTHDEDLYDLSYSEMSFGVHWCPFGNLARLPSSFEDGEFSSSAYHDILGGQHAVYAEHHNTVVNSVNHPCPYIAYFGAIHPSSSNSGGNVSEISTFSHWNGSSVHSDMPTSYTYPTLDLHYHSWEQHSPPFSTYTSRLVAGDRRSISPRTQRPSRGGSDVPRSSSYMHPPGGHSSSGSVSSVTSSMLPPYPGSNARSRDRVQALQAYYQSPNSTTTRTHVPSGSRRSGNHSGSPQIAPDQSGFFFVPSSSSGRSSFPEDACLPSRYHAWEREHISSLSIVDRDSAWRQYRQTVGRSERSSNYRLRHGSERMHSHNR 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01650 417 ProSiteProfiles Zinc finger RING-type profile. 33 78 IPR001841 -
Aip09g01650 417 MobiDBLite consensus disorder prediction 299 341 - -
Aip09g01650 417 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 29 87 IPR013083 -
Aip09g01650 417 SUPERFAMILY RING/U-box 29 80 - -
Aip09g01650 417 MobiDBLite consensus disorder prediction 400 417 - -
Aip09g01650 417 PANTHER PROTEIN, PUTATIVE-RELATED 21 417 - -
Aip09g01650 417 MobiDBLite consensus disorder prediction 269 292 - -
Aip09g01650 417 MobiDBLite consensus disorder prediction 395 417 - -
Aip09g01650 417 MobiDBLite consensus disorder prediction 244 341 - -
Aip09g01650 417 SMART ring_2 33 77 IPR001841 -
Aip09g01650 417 Pfam Ring finger domain 32 78 IPR001841 -
Aip09g01650 417 PANTHER OS09G0511500 PROTEIN 21 417 IPR044274 GO:0004842
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01650 Aip-Chr9 36560513 36569181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01650 29 78 C3H Transcription Factor Family AT1G53820 40.000 8.65e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01650 - - adu:107465306 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00919 06 12852958 12857404 Aip09g01650 09 36560513 36569181 PCT