Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01648 ATGATCTGTGGTGTGGCTGATGGTGCTGCTGCTGCCTTTTGCGCATCGGTAGGTGGTGTCCTCTTTGCCCTTGAAGAGGCAACTTCATGGACATTTTTCACCACAACAGTAGTTGCTATTGTTTTAACAGCTGCAATTCAGCTTTGCGCCACCAGGAAATGCGGCTTATTCGGAGAAGGTGGTCTGATAATGTATGATGTTGGTTCTTCCAAGGTAACATACAGTGCCGGCGACATACTAGTAGCAATACTATTGGGAGTCATTGGAGGAGTTCTTGGAATTAATAAGTAA 291 0.4536 MICGVADGAAAAFCASVGGVLFALEEATSWTFFTTTVVAIVLTAAIQLCATRKCGLFGEGGLIMYDVGSSKVTYSAGDILVAILLGVIGGVLGINK 96
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01648 96 Gene3D Clc chloride channel 1 95 - -
Aip09g01648 96 SUPERFAMILY Clc chloride channel 2 94 IPR014743 -
Aip09g01648 96 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 2 93 - -
Aip09g01648 96 PANTHER CHLORIDE CHANNEL PROTEIN CLC-C 2 93 - -
Aip09g01648 96 Pfam Voltage gated chloride channel 1 94 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01648 Aip-Chr9 36539349 36539913 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01648 3 93 Ion Channels AT5G40890 54.545 3.36e-28 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01648 K05016 - tcc:18611993 94.3597