Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01640 ATGTCCTCGTTGTTGTCACCATCAAGCTTCTATGTCAATGTCGTTGCTCGCCGTCTTCCTCTGATCATTCTGCCGTTGCTCGTCGTCGTGTCATTCTTTTCTCACTATCGCTCCTATGCTCACTCCTTTGTCGCAGATCATCACATCGCTGTCCAGATCTCTCGTTGCTCATCACCGTGTCGTTCTTTTCTCACTGTTGCCTCCTCTGGTCTTGCCACCTCCTCTGCTCATCACTCCTTTGTCACAGATCATCACATCAATGACCAGATCAGTCGTTGCTTGTCATTGGGTCATTCTTTTCTCACTGCCGCCTCCTCTGGTAACTTCTTCTCCAACAACAACAATAGTCCTCCGGTGAAGCTGACAGGGCAAGTATTGAAACACTTGTTATATCTTATGGGCTTTGCCAAAAAGGGTGTTCAACAGCGTGTTGCTCTTGCTCTTGCTCATTTATGTCCTATTGATGATTGTAGAACTATCTTCATTGACAACAATGGAAAAAGATTCTATGCTCATCGAGTTTGTTTAGTCAAGTCAGATGTATTTCGAGCAAGGTTTTATGGTGGTTACAGGGAAATGGAAGCCAAAGATATAGTGGTTCCAGACATCAAATGGGATGTATTTGAATTGATGAAGAGGTGA 642 0.4424 MSSLLSPSSFYVNVVARRLPLIILPLLVVVSFFSHYRSYAHSFVADHHIAVQISRCSSPCRSFLTVASSGLATSSAHHSFVTDHHINDQISRCLSLGHSFLTAASSGNFFSNNNNSPPVKLTGQVLKHLLYLMGFAKKGVQQRVALALAHLCPIDDCRTIFIDNNGKRFYAHRVCLVKSDVFRARFYGGYREMEAKDIVVPDIKWDVFELMKR 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01640 213 Gene3D Potassium Channel Kv1.1; Chain A 150 213 IPR011333 -
Aip09g01640 213 ProSiteProfiles BTB domain profile. 157 213 IPR000210 GO:0005515
Aip09g01640 213 Pfam BTB/POZ domain 161 211 IPR000210 GO:0005515
Aip09g01640 213 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 165 213 IPR044282 -
Aip09g01640 213 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 PROTEIN 165 213 - -
Aip09g01640 213 SUPERFAMILY POZ domain 160 211 IPR011333 -
Aip09g01640 213 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 120 166 IPR044282 -
Aip09g01640 213 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 PROTEIN 120 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01640 Aip-Chr9 35884826 35887904 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Aip09g01640 BTB 0.00015 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01640 - - aip:110266649 215.698