Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01638 ATGTCTCTTGGAGCTATTTCAAGAGAAACTCATGAAGCAATTGCAATTGCAATGAACAGATTAGGTGGAAAATCAAATTCAGGGGAAGGTGGTGAGTTAATGTTATCAAAGCCTCGAATTTTCTGTCTTTCGCAATATGGAACTTTTATGCAAGCAGAGATTCAATTGCTTTCGCCACTCGTTCCTGTTCGTCAATTGAGCTTCCTCAGGTTACTGGTTCATCATGGGTACCCTTTGCTTCTTGGATCACTGATTACTTGGGTTGAGCATTCCCAATATGATGAGAGTCTCATTCACCAACTGTATTGGCCGTTGATTGCTACTGAGGAATCTAATGGGAATAAGGATGCTATGGACCTTGAGATTCGTTCAAGAGGGAATGTGGTGGGGAAACTAGTAAGAACAAAGCACCATAAGGAAAGTATTTTTCCTTTGGTGATCAACTCTTCTGAATCAAACCTATCAGGTTCAAGAAGAATTCATGCACATATGGCTGATGGATGTTGA 507 0.4063 MSLGAISRETHEAIAIAMNRLGGKSNSGEGGELMLSKPRIFCLSQYGTFMQAEIQLLSPLVPVRQLSFLRLLVHHGYPLLLGSLITWVEHSQYDESLIHQLYWPLIATEESNGNKDAMDLEIRSRGNVVGKLVRTKHHKESIFPLVINSSESNLSGSRRIHAHMADGC 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01638 168 Pfam Conserved region in glutamate synthase 1 33 IPR002932 GO:0006537|GO:0015930|GO:0016638
Aip09g01638 168 PANTHER FERREDOXIN-DEPENDENT GLUTAMATE SYNTHASE 1, CHLOROPLASTIC/MITOCHONDRIAL 1 35 - -
Aip09g01638 168 PANTHER FAD NADPH DEHYDROGENASE/OXIDOREDUCTASE 1 35 - -
Aip09g01638 168 Gene3D Aldolase class I 1 142 IPR013785 -
Aip09g01638 168 SUPERFAMILY FMN-linked oxidoreductases 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01638 Aip-Chr9 35865697 35868136 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01638 49 106 Homeobox Transcription Factor Family AT4G00730 36.957 1.10e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01638 K00284 - ahf:112790748 139.813