Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01633 ATGGCGCTTGACACGTGTAAGCAGCTCATGAATCTCTCTATTAGCGAGTTTTCGAGGTCACTTGAGAGAATAGGACAGTTTAATCTCAACAACCTCGACGAAATCCTCACTAGCCTAAAGGTATGGCTCAGCGGAGCGGTGACATATCAAGAGACATGTTTGGATGGTTTTGAGAACACAACAAGCAAAGCTGGTGAAAAGATGAAGGAAGCGTTGACCAATGCGACGAAGATGAGCAGCAATGCCCTAAGCATAATCACGGAACTCGCAAATACTTTCTCAGAGTTGAACGAAACGCGGCAAGACAGCTCTCATCGTCGCCTCAAGGATGAGTTCCCATCGTGGGTTGACAATGGTGCTGGTGTACGTAGACTCCTTCTATCGAGTTCACGCAAGCTGAAGCCCAATGTGATTGTGGCCAAAGATGGCAGCGCAAAGTTCACTAGCATCAATCAGGCTTTGAAGAATGTTCCTCAGAAGAACATGAAGCCATTTGTGATATTCATCAAGAAAGGTGTTTACAAAGAGTATGTTGAGGTTACCAGGGAGATGAGACATGTCGTCTTTGTTGGTGAAGGTGGCGACAAGACACGAATCACTGGCAACAAAAACTTCATTGATGGGACCAACACTTATAAAACTGCTACAGTAGCAATTCAAGGAGATTACTTTATCGCCATCAACATGGGGTTTGAGAACTCTGCAGGTGCCCATAAACATCAAGCAGTAGCAGTAAGGGTCCAAGCAGACAAGTCTATCTTTTACAAATGCTCGTTCGATGGCTACCAAGACACACTCTATGCTCACACCATGCGTCAATTCTACCGAGACTGCACCATCTCAGGTACCATCGATTTCATCTTCGGCGACGCCGTCACCGTCTTCCAAAACTGCACCTTCGTGGTCCGGAAGCCCATGCAGAACCAGCAATGCATCGTGACGGCGCAAGGCCGCAAGGAGAAGCACCAACCTTCAGGAATAGTAATCCACGGCGGCTCGATTGTGGCGGAGCCAGGAGAATCAAAGGACCACAAGAACGTGAAGTTCGATAGCAAGGCTTACTTAGCGCGTCCATGGAAGAATTACTCAAGGACGGTGTTCTTGCAAACATACATCGGAGATTTGATTGAACCCGAAGGGTACATGCCTTGGCAAGGGCCAGAAGGTAATACCGGCATGGATACTTGTTACTATGCAGAGTTCAATAACATTGGCCCTGGTTCAAATGCAACGAAGCGCGTGAAATGGCATGGTGTCAAGCACCTCACGGAAAAATCTGTAGGTGCTTTCTTCCCATCCAAGTTCTTCCATGGTGACGATTGGATTAGGTTTACTAAGGTTCCTTACTCCCCAGGCTTAACTAATTTCACGAAGCACAAAATTTAA 1386 0.4683 MALDTCKQLMNLSISEFSRSLERIGQFNLNNLDEILTSLKVWLSGAVTYQETCLDGFENTTSKAGEKMKEALTNATKMSSNALSIITELANTFSELNETRQDSSHRRLKDEFPSWVDNGAGVRRLLLSSSRKLKPNVIVAKDGSAKFTSINQALKNVPQKNMKPFVIFIKKGVYKEYVEVTREMRHVVFVGEGGDKTRITGNKNFIDGTNTYKTATVAIQGDYFIAINMGFENSAGAHKHQAVAVRVQADKSIFYKCSFDGYQDTLYAHTMRQFYRDCTISGTIDFIFGDAVTVFQNCTFVVRKPMQNQQCIVTAQGRKEKHQPSGIVIHGGSIVAEPGESKDHKNVKFDSKAYLARPWKNYSRTVFLQTYIGDLIEPEGYMPWQGPEGNTGMDTCYYAEFNNIGPGSNATKRVKWHGVKHLTEKSVGAFFPSKFFHGDDWIRFTKVPYSPGLTNFTKHKI 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01633 461 PANTHER PECTINESTERASE 1 454 - -
Aip09g01633 461 ProSitePatterns Pectinesterase signature 2. 280 289 IPR033131 -
Aip09g01633 461 ProSitePatterns Pectinesterase signature 1. 161 180 IPR018040 -
Aip09g01633 461 SUPERFAMILY Pectin lyase-like 134 452 IPR011050 -
Aip09g01633 461 PANTHER PECTINESTERASE 1 454 - -
Aip09g01633 461 Gene3D Invertase/pectin methylesterase inhibitor family protein 1 91 IPR035513 -
Aip09g01633 461 TIGRFAM PME_inhib: pectinesterase inhibitor domain 2 89 IPR006501 GO:0004857
Aip09g01633 461 Gene3D - 130 453 IPR012334 -
Aip09g01633 461 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 2 89 IPR035513 -
Aip09g01633 461 CDD PMEI-like_3 1 91 - -
Aip09g01633 461 Pfam Pectinesterase 136 439 IPR000070 GO:0030599|GO:0042545
Aip09g01633 461 Pfam Plant invertase/pectin methylesterase inhibitor 2 85 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01633 Aip-Chr9 35682518 35692609 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01633 1 453 Carbohydrate Esterase AT3G05610 52.088 6.62e-178 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01633 K01051 - gmx:100794799 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00906 06 12601200 12603804 Aip09g01633 09 35682518 35692609 PCT