Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01630 ATGGCCACAAGAACTACCTTGAAGACTCCATTACCAACTACCTTCTTCACCCTTCTTTCCCTCTTGATATTCCTTTCTCCATCTCTTGCTAATGATGATTTCACTTCCTCTCCATGCAACCTCACACCCCACCCTACATTTTGCACTGCCACTCTACCCTCTCCCAATATTTTATCCGTACACGACCAATGCCGGTTCTTCCTTAACCAATCCTTAGTAATAACAAAGAAGGTTCTCGAAATGGTCTCTTCTTATCTAAGAGACCGCCGTATGAGAATTCCGGGTTCCACTTTACATGCTATCGAAGACTGCGTGAACTCTGCAGAACTGAACATTGATTTCTTGTCCATTGTCCTCAGAGCTGCCGAAAGAACCGCCGCAAATAGCTATCAAGCTCATTATTACGATACACAAACAATGCTTAGCGCCGTCTTAACCAATCATCAAACGTGTATGGACGGTTTTAACGAAGTAACTCCATATCCAAGAATCACCGGGGGATTATCAAGTGTACTGTCAAATGCATACAAGCTTTACAGCGTTTCGCTGGCGCTTTTCGCTCACGGTTGGGTTAAAAACCCGGCCGCAAGACCAAGAACTACCATGAACAGAAAGTTACACCAAACAATCTTAGATGGCGATGAAGGGTTGGTGGTGAGAGAGAAAGTTGTGGTGAATCCGAACGGATCTGGGGATTTCACCACCATAAATGATGCTGTGGATGCAGCACCTAACAATACCGGCACCAACAATGGGTACCATGTTATTTATGTTGTTGCTGGGATTTACAATGAGTACGTGTCCCTGTCGAAGAACAAGCAGAACGTAATGATTGTTGGAGATGGCATCAATCGCACCGTGATCACTGGCAATCGAAGCGTGGTTGATGGATGGACCACTTTCCAATCTGCAACATTCGCTGTAGCTGGAAAAGGGTTTGTAGCAGTGAACATTACATTTCGCAACACAGCGGGCCCCGCCAAGCACCAAGCAGTAGCTGTAAGAAACAGTGCAGATATGTCCACATTCTACACCTGCAGTTTCGAAGGCTATCAAGACACACTGTACACGCATTCTCTAAGACAATTCTACAAAAACTGTGACATTTACGGAACAGTTGACTTTATCTTCGGCAACGCCGCAACTTTGTTTCAAGACTGCAACATCTTTCCAAGACTACCCATGCAAAACCAATTCAACGCTATCACGGCGCAGGGCCGAATGGATCCGAACCAAAACACCGGAATTTCCATTCAGAACTCATGGATCGTTGGAAATGATGGGAACTACAGCAGGGTAGAAACGTATCTGGGAAGGCCTTGGAAGGAGTATTCAAGAACGGTTTACGTGCAGTGTTTCATGGATGGGATAGTTGATGGAAAAGGTTGGGTTGAGTGGAATGGGGATTTTGCATTGAGGACCTTGTATTTTGCGGAATTTGCTAATTGGGGTCCAGGTTCAAATACTACTAATAGGGTCACTTGGGAAGGGTACCATCTGGTCGATGAAAATGATGCAGATGGTTTCACTGTGTACAATTTCATACAAGGTGATTCATGGTTGCCCAAGACTGGAGTGCCCTTCAAAGCTGGGTTAttgaaattataa 1608 0.4484 MATRTTLKTPLPTTFFTLLSLLIFLSPSLANDDFTSSPCNLTPHPTFCTATLPSPNILSVHDQCRFFLNQSLVITKKVLEMVSSYLRDRRMRIPGSTLHAIEDCVNSAELNIDFLSIVLRAAERTAANSYQAHYYDTQTMLSAVLTNHQTCMDGFNEVTPYPRITGGLSSVLSNAYKLYSVSLALFAHGWVKNPAARPRTTMNRKLHQTILDGDEGLVVREKVVVNPNGSGDFTTINDAVDAAPNNTGTNNGYHVIYVVAGIYNEYVSLSKNKQNVMIVGDGINRTVITGNRSVVDGWTTFQSATFAVAGKGFVAVNITFRNTAGPAKHQAVAVRNSADMSTFYTCSFEGYQDTLYTHSLRQFYKNCDIYGTVDFIFGNAATLFQDCNIFPRLPMQNQFNAITAQGRMDPNQNTGISIQNSWIVGNDGNYSRVETYLGRPWKEYSRTVYVQCFMDGIVDGKGWVEWNGDFALRTLYFAEFANWGPGSNTTNRVTWEGYHLVDENDADGFTVYNFIQGDSWLPKTGVPFKAGLLKL 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01630 535 PANTHER PECTINESTERASE 19 531 - -
Aip09g01630 535 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 17-RELATED 19 531 - -
Aip09g01630 535 Pfam Plant invertase/pectin methylesterase inhibitor 36 185 IPR006501 GO:0004857
Aip09g01630 535 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 36 187 IPR035513 -
Aip09g01630 535 Gene3D - 217 532 IPR012334 -
Aip09g01630 535 CDD PMEI-like_3 39 190 - -
Aip09g01630 535 ProSitePatterns Pectinesterase signature 2. 369 378 IPR033131 -
Aip09g01630 535 SMART PMEI_2 30 185 IPR006501 GO:0004857
Aip09g01630 535 SUPERFAMILY Pectin lyase-like 220 531 IPR011050 -
Aip09g01630 535 TIGRFAM PME_inhib: pectinesterase inhibitor domain 15 185 IPR006501 GO:0004857
Aip09g01630 535 Pfam Pectinesterase 223 518 IPR000070 GO:0030599|GO:0042545
Aip09g01630 535 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 188 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01630 Aip-Chr9 35622578 35626443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01630 6 533 Carbohydrate Esterase AT4G02330 49.825 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01630 K01051 - gmx:100810329 736.487