Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01623 atgGGGCTTGGTAAAACATTGCAAACTATATCTTTGGTAGGTTATTTACATGAGTTCAGGGGAATCAAAGGACCTCATATGGTGGTAGCTCCTAAATCTACTCTTAAAAATTGGATGAATGATATTCAGCACTTTTGTCCTATTCTACGTGCAGTAAAGTTTCTTGGCAACCCTGAAGAGAGGAAATATATAAGGGAGGAATTACTAGTAGTTGGGAAGTTCGATGTTTGTGTTACAAGTTTTGAAATGGCAATCAAGTAG 261 0.3678 MGLGKTLQTISLVGYLHEFRGIKGPHMVVAPKSTLKNWMNDIQHFCPILRAVKFLGNPEERKYIREELLVVGKFDVCVTSFEMAIK 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01623 86 PANTHER ISWI CHROMATIN-REMODELING COMPLEX ATPASE CHR17 1 86 - -
Aip09g01623 86 PANTHER SNF2/RAD54 HELICASE FAMILY 1 86 - -
Aip09g01623 86 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 84 IPR027417 -
Aip09g01623 86 Pfam SNF2-related domain 1 84 IPR000330 GO:0005524|GO:0140658
Aip09g01623 86 Gene3D - 1 86 IPR038718 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01623 Aip-Chr9 35178501 35180116 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Aip09g01623 SNF2_N 3.7e-13 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01623 K11654 - ahf:112775080 177.563