Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01617 ATGGCAACACCCTTACAAGTAACAAGCGTTTCGGTGTCGCGACCGGAGACCGGAGAAATTAGCCCAATCTTGCTTTCTTATACAATTGAGTTGGAGTACAAGCAGTTCAAGTGGCGTCTTCACAAGAGAGCAGCGCAAGTTCTCTACTTACAGTTTGCCCTGCGGAAACGTGTACTAATTGAACAACTTCATGACAAACAAGAGCAGATAAAAGAATGGCTTCAGAGCTTAGGAATAGTAGATCACACAGTGACAATACACGATGATGAAGAACCTGATGATGGAGCTGTGCCTTTACATCATGAAGACAGTGTTAAAAGCAGATATGTCCCATCTGTTGCTGCTCTATCAATAATTCGTCCATCATTAGGAGGGCAGCAATCGGTTGTAGACAGGGCAAAAGTCGCAATGCAAAGTTATTTGAATCTTTTCTTAGAAAACCTGGATATTGTGAATTCTTCAGAGGTCTGCAGGTTTTTGGAAGTCTCCAAGCTATCCTTTTTACATGAGTATGGTCCAAAGCTGAGAGAGGGATATGTGACAGTGAAGCATTTATCAAATGTTTCACAGGATTCAGAAGCATGCCATCCATGTGATTGGTTTCGTGGCTGTAATAACAGCTGGAAGAAGGTATGGGCTGTTTTGAAACATGGATTTTTGGCCTTGCTGGATGGCCCTTTCAGCAATACACCACTGGACATACTTGTTTTTGATGTTCTTCCATCCTCAAAAGGAGATAAAACACAAATACATTTAGCTGATCCTGTAAAGGAATGTAATCCTTTGCGATACACATTTAAGGTTACTAGTGGGAATAGGACCATATCATTGAGAACTACCAGCAATGGTAGGGTTAAAGCTTGGGTAAATGCAATTAATGAAGCTGGTCTTCGACCTTCGGAGGGTTGGTGTCGTCCTCATCGGTTTGCTTCATTTGCTCCTGTAAGAGGTTTGACTGAAGATGGGAGCCAAGCCCAGTGGTTTGTAGACGGAAAGGCAGCATTTGAAGCAATTGCTTCTTCAATTCAAGCTGCAAAATCAGAGATCTTCATTACAGGATGGTGGCTTTGCCCCGAGCTATATCTTAAACGTCCTTTTGATGGCTTTTCAAAACTCAGACTTGACTCGTTGCTAGAAGAAAAAGCTATGCAAGGAGTTCAGATATATGTGCTTCTCTACAAGGAGGTTTCTCTGGCTTTGAAAATCAACAGCTCGTATAGTATGAGAAGACTCCTCAAAATTCATGAGAATGTGAGGGTATTGCGCTATCCTGACCATTTAACCAGTGGCGTGTATTTATGGTCGCACCATGAGAAACTTGTAATTGTTGATTACAAGATTTGCTATATTGGAGGATTAGACTTATGCTTCGGTCGATATGACACGCCTGACCATAAAGTTGGTGATTGCCCCTCCATTACATGGCCCGGAAAGGACTATTACAACCCAAGAGAATCTGAACCAAATTCATGGGAAGACACGATGAGAGATGAATTGGATCGTGAGAAATATCCTCGTATGCCATGGCATGATGTCCATTGTGCCCTTTGGGGACCTCCTTGTCGTGATATTGCTCGACATTTCATTCAACGTTGGAACCATGCTAAGAGAACTAAAGCTCCAAATGAGCATGAAATCCCGCTACTTATGCCTCACCATCACATGGTCCTCCCTCATTACATGGGAAAAAGCAAAGATATGGACATTACTGGAAAGAAAGATGAAGATGGCACGAAAGAACTTGAGAGTAAGGATTCATTTTCGGAGTCTCCGGTACAAGATATACCGCTGCTTTTACCTCAAGAATCTGGTGGACTAATTACTTCGCTCGGAGATCATTCCAATATTAGTGAAAAGGTTCCATTATCATCCCAAAAGTTGGAACATGAAACATCAACTCCAAACACAAAGATCAATGGGTTTCATGATGAAGTTGTTCCTTTTGACCTTGGTGCACAATCTGTTGTTTATGATCTTGACGATTGGTGGGAAACACCAGATGAAGGTACCAAAGACGATAATAATTTGGAATATAGACAAGTTGGTCCACGTACTTCTTGTCGCTGTCAGGTAATCAGAAGTGTCGGCCAATGGTCAGCTGGAACCAGTCAGCATGAAGAAAGCATTCACACAGCATATTGTTCTCTTATTGAAAAAGCAAAGCATCTTATCTACATTGAGAACCAATTTTTCATATCAGGTCTAGCAAAGGATGACACAATTCAGAACCGTGTACTGGAAGCACTATACAGGCGCATTTTACAAGCACACAAGGAACAGAATAAATTTAGAGTTATAGTTGTGATGCCCCTCTTGCCTGGGTTCCAAGGTGGTCTCGATGATGGTGGTGCTGCAACTGTCAGGGCTTTAACACATTGGCAGTATAGAACAATTTCAAGGGAAAAGCATTCTATATTACACAATCTTGAAGCTAAAATTGGTCCTAAGGCTCATGATTATATTTCTTTCTATGGTCTACGATCTCATGGTAGACTTCATGCCGATGGTTACGTGGCCACAAGTCAGGTATATGTGCATAGTAAATTGATGATAATAGATGACCGTGTAGCTGTCATCGGATCATCTAACATTAACGACCGTAGTCTGCTTGGGTTAAGAGACTCTGAGATAGGAGTGGTTATAGAAGACAAGGAATGTGTTGAATCATTGATGAATGGAAAACCATGGAAAGCTGGGAAATTTTCTTATAGCCTCCGTTGTTCCTTATGGTCTGAACACCTTGGCCTTCATACAGAAGAGGTCAGTAAAATTAGTGATCCATTGGCAGACACAACATACAAGGACTTGTGGTCAGCAACTGCGAAGGAAAATACTAGGATATATGATGAGGTCTTCGGTTGCATTCCGAATGATCAGATACACTCAAGATCTGCTCTTCGACAAAGCATGGCTCAGCGGAAAGAAAAGGTGGGCCACACCACCATAGATTTGGGAATAGCCCCTGATAAGTTAATAACTAGTGATGCCTATGGAGAAATCAATGAGACAAATTCAATGGATAGATTGAACTCTGTAAAGGGACATCTTGTTTCCTTTCCTTTGGAGTTCATGCGTGATGAAGATCTAAGACCAGCCTTTATTGAGAGTGAGTTTTACGTAGCTCCTCAAGTATATCATTAG 3141 0.4167 MATPLQVTSVSVSRPETGEISPILLSYTIELEYKQFKWRLHKRAAQVLYLQFALRKRVLIEQLHDKQEQIKEWLQSLGIVDHTVTIHDDEEPDDGAVPLHHEDSVKSRYVPSVAALSIIRPSLGGQQSVVDRAKVAMQSYLNLFLENLDIVNSSEVCRFLEVSKLSFLHEYGPKLREGYVTVKHLSNVSQDSEACHPCDWFRGCNNSWKKVWAVLKHGFLALLDGPFSNTPLDILVFDVLPSSKGDKTQIHLADPVKECNPLRYTFKVTSGNRTISLRTTSNGRVKAWVNAINEAGLRPSEGWCRPHRFASFAPVRGLTEDGSQAQWFVDGKAAFEAIASSIQAAKSEIFITGWWLCPELYLKRPFDGFSKLRLDSLLEEKAMQGVQIYVLLYKEVSLALKINSSYSMRRLLKIHENVRVLRYPDHLTSGVYLWSHHEKLVIVDYKICYIGGLDLCFGRYDTPDHKVGDCPSITWPGKDYYNPRESEPNSWEDTMRDELDREKYPRMPWHDVHCALWGPPCRDIARHFIQRWNHAKRTKAPNEHEIPLLMPHHHMVLPHYMGKSKDMDITGKKDEDGTKELESKDSFSESPVQDIPLLLPQESGGLITSLGDHSNISEKVPLSSQKLEHETSTPNTKINGFHDEVVPFDLGAQSVVYDLDDWWETPDEGTKDDNNLEYRQVGPRTSCRCQVIRSVGQWSAGTSQHEESIHTAYCSLIEKAKHLIYIENQFFISGLAKDDTIQNRVLEALYRRILQAHKEQNKFRVIVVMPLLPGFQGGLDDGGAATVRALTHWQYRTISREKHSILHNLEAKIGPKAHDYISFYGLRSHGRLHADGYVATSQVYVHSKLMIIDDRVAVIGSSNINDRSLLGLRDSEIGVVIEDKECVESLMNGKPWKAGKFSYSLRCSLWSEHLGLHTEEVSKISDPLADTTYKDLWSATAKENTRIYDEVFGCIPNDQIHSRSALRQSMAQRKEKVGHTTIDLGIAPDKLITSDAYGEINETNSMDRLNSVKGHLVSFPLEFMRDEDLRPAFIESEFYVAPQVYH 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01617 1046 SUPERFAMILY Phospholipase D/nuclease 677 891 - -
Aip09g01617 1046 MobiDBLite consensus disorder prediction 564 593 - -
Aip09g01617 1046 Pfam Phospholipase D Active site motif 432 459 IPR001736 GO:0003824
Aip09g01617 1046 ProSiteProfiles PH domain profile. 173 297 IPR001849 -
Aip09g01617 1046 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 432 459 IPR001736 GO:0003824
Aip09g01617 1046 CDD PH_PLD 151 295 - -
Aip09g01617 1046 PIRSF PLD_euk 559 1046 IPR016555 GO:0004630|GO:0006654|GO:0048017
Aip09g01617 1046 PIRSF PLD_euk 2 572 IPR016555 GO:0004630|GO:0006654|GO:0048017
Aip09g01617 1046 MobiDBLite consensus disorder prediction 621 640 - -
Aip09g01617 1046 MobiDBLite consensus disorder prediction 564 587 - -
Aip09g01617 1046 Gene3D Endonuclease Chain A 664 905 - -
Aip09g01617 1046 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 841 868 IPR001736 GO:0003824
Aip09g01617 1046 SUPERFAMILY Phospholipase D/nuclease 281 552 - -
Aip09g01617 1046 CDD PLDc_vPLD1_2_yPLD_like_1 325 470 - -
Aip09g01617 1046 SMART pld_4 841 868 IPR001736 GO:0003824
Aip09g01617 1046 SMART pld_4 432 459 IPR001736 GO:0003824
Aip09g01617 1046 Gene3D Endonuclease Chain A 318 554 - -
Aip09g01617 1046 CDD PLDc_vPLD1_2_yPLD_like_2 701 885 - -
Aip09g01617 1046 MobiDBLite consensus disorder prediction 621 639 - -
Aip09g01617 1046 PANTHER PHOSPHOLIPASE D 12 1043 IPR015679 -
Aip09g01617 1046 PANTHER PHOSPHOLIPASE D ZETA 2 12 1043 - -
Aip09g01617 1046 SMART PH_update 174 299 IPR001849 -
Aip09g01617 1046 Gene3D - 174 299 IPR011993 -
Aip09g01617 1046 Pfam PLD-like domain 714 888 IPR025202 -
Aip09g01617 1046 SUPERFAMILY PH domain-like 203 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01617 Aip-Chr9 34742517 34753152 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01617 10 1046 Phospholipase D Gene Family (Wang group) AT3G05630 65.586 0.0 1367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01617 K01115 - gmx:100796914 1748.79