Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01613 ATGGGTCATCTTTCTTCAATGTTCAATGGTTTGGCAAAATCACTGGCAATTAAGAAAGGGAGGAATTCAGAAAGATGCAGCGGAAGAGAAGCGGCGGAAGCGATGGCAAAGGAAGCAAAAAAGAATGAGTTCTTGTTATGTAGCTCAGGCACTGTTAGTGTTGATGGCTCAAACAACTTCGCCTCAGTTTTCTCCAAAAGAGGCAAGAAAGGAATCAATCAAGATTGCTGCATAGTCTGGGAAGAATTTGGGTGCCAAGAGGACACGATCTTCTGTGGGATCTTTGATGGGCATGGGCCATGGGGTCACTTTGTGGCGAAAAGAGTGAGAGAATCAATGCCGNNNNNNNNNNNNNNNNNNNNNNNNCTTGATCTTGACCCAGATTCTGGAGATGCCGATGTTGAGGCAGAGAAGATGCAAAACTGTTTTAACATATGGAAGCATTCCTACTTGAAGACTTGTGCTGCCATTGATCGAGAACTCGAGCAGAATCGCAAGATCGATTCGTTTTTCAGTGGAACCACTGCCCTCTCCATTGTTAGACAGGGTGAACTAATTGTAATTGCAAACGTTGGTGACTCGCGTGCTGTATTAGCTACAACATCGGATGATGGGAGTTTGGTACCAATTCAGCTCACAGTAGATTTCAAGCCCAATCTACCTCAGGAAGCAGCTCGAATACTGGAGTGCCAAGGGCGAGTCTTTTGCTTAGAAGACGAGCCGGGGGTGCACAGGGTATGGCTGCCGGACGAAGAGTCGCCGGGGCTGGCCATGTCTAGGGCACTTGGTGACTACAGCGTCAAAGAGTATGGCCTAATATCGGTGCCTGAGGTAACCCAATGGAACGTAACCACCAGAGACCAGTTTGTTGTGCTAGCTACTGATGGGGTGTGGGATGTAATATCGAACGAAGAAGCGGTGGAGATTGTATCTTCAACAGCAGAGAGAGGAAAGTCAGCAAAACGTTTGGTGGAGTGCGCGAAGCGTTCATGGAAACGCAAGAGGGGTGGAATTGCCATGGATGACATCTCTGCCATTTGTCTTTTCTTTCACTCTCCTTGTAACCTTCTTGATAACCAACTTGCCACCCTAAACTAA 1098 0.4636 MGHLSSMFNGLAKSLAIKKGRNSERCSGREAAEAMAKEAKKNEFLLCSSGTVSVDGSNNFASVFSKRGKKGINQDCCIVWEEFGCQEDTIFCGIFDGHGPWGHFVAKRVRESMPXXXXXXXXLDLDPDSGDADVEAEKMQNCFNIWKHSYLKTCAAIDRELEQNRKIDSFFSGTTALSIVRQGELIVIANVGDSRAVLATTSDDGSLVPIQLTVDFKPNLPQEAARILECQGRVFCLEDEPGVHRVWLPDEESPGLAMSRALGDYSVKEYGLISVPEVTQWNVTTRDQFVVLATDGVWDVISNEEAVEIVSSTAERGKSAKRLVECAKRSWKRKRGGIAMDDISAICLFFHSPCNLLDNQLATLN 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01613 365 SMART PP2C_4 51 348 IPR001932 -
Aip09g01613 365 Gene3D - 51 352 IPR036457 -
Aip09g01613 365 PANTHER ALPHABET, ISOFORM E-RELATED 1 353 - -
Aip09g01613 365 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 1 353 - -
Aip09g01613 365 ProSiteProfiles PPM-type phosphatase domain profile. 60 350 IPR001932 -
Aip09g01613 365 SUPERFAMILY PP2C-like 54 352 IPR036457 -
Aip09g01613 365 CDD PP2Cc 59 350 IPR001932 -
Aip09g01613 365 Pfam Protein phosphatase 2C 81 323 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01613 Aip-Chr9 34557446 34561035 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01613 1 351 PP2C-type Phosphatase Gene Family AT3G05640 68.272 1.90e-180 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01613 - - gmx:100794039 572.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00900 06 12463711 12467134 Aip09g01613 09 34557446 34561035 PCT
Aip01g00197 01 1971921 1973724 Aip09g01613 09 34557446 34561035 PCT