Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01608 ATGGCCAAGGCTTCTGAGGCATATGCCTTTCTCAAGAGATGTCCTTCACTGACACTGGGTTCCATGTTGGAGGAGATTGCTGCTATTCTTCCTGGCCATGAATTTGCTTCTATGAGTGACATTCAATCTCAGCAGGTTCTTCTTCAAATTCTTGCAAGGCCATGGTGGAAGTTGCAAAGAATAATAAGAGAGGACACAACAATAGTAGTAAGTAAACTGTTCATAGGAAATCCATTGAGACATTTGGTCAAAGAACTTCACAGTAGAGAGGTGTCACAAGGCATAGATGGACCGGTAGATATAAAGCACATTTGTGGGATAATAGTTGCAAAAAAGAAGGGCAAACTAGGAAAGGAAGACAAGGATACTCTTAGAGAGGGCAAGCATGTTTTTGGTGTTGCTCACATTTTTGCATCATTCAATGACACCTTTATTCATGTGACTAATTTGTCTAGAAAGGAAACCCTTGTCCCCATCACTGTCTCCTGTGAAAATGGTACCCACTAG 507 0.4142 MAKASEAYAFLKRCPSLTLGSMLEEIAAILPGHEFASMSDIQSQQVLLQILARPWWKLQRIIREDTTIVVSKLFIGNPLRHLVKELHSREVSQGIDGPVDIKHICGIIVAKKKGKLGKEDKDTLREGKHVFGVAHIFASFNDTFIHVTNLSRKETLVPITVSCENGTH 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01608 168 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 94 160 IPR001971 GO:0003735|GO:0005840|GO:0006412
Aip09g01608 168 PANTHER BNAA05G27530D PROTEIN 94 160 - -
Aip09g01608 168 Gene3D Ribosomal protein S11 109 166 IPR036967 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01608 Aip-Chr9 34375951 34378244 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01608 109 160 Cytoplasmic Ribosomal Protein Gene Family AT2G36160 64.286 1.58e-14 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01608 K02955 - ahf:112777064 234.187