Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01594 ATGGTGATCGACGACGTCCTTCACGGCGACGATGGACGACTTGTGACTGAAGGACAGCAGCAGCTCTCAGACTCTGGCTCTCTCAGGCATAGAGGAGGAAGTTGGAACAATTCAGAATTTACTCAAATACCCCTACCTTCCATAGCAACCACTTTCCTCCAACTTCCCTCCATCAACCAGAGGTTGCCATCACTGGCCGCTCACGTAACTGTTGAACACGTCGCTTACCTCGCCAGGTCGCCCCTCCAGTCTCTAGCCTTTGCTCATCTCGCTGTCACTCACCTCTATGGGTGCATTCTTTACATGGAGGCTCTATCAATAGATTGCACAACTGATGTGAATAATGAGTTTGAGTGGTCTTCAGAGGATGAAATAGACGATGTTGAAGGGTTAGAGTACGAAGACATTTTGGGATTGACTGCTGGAGACATAATGAGGATGGTTTTCTGCAGTGATGATGGAGCTTATGAGTTTTACAGGGTGTTTGGTAAATTTCACGGATTTGGCATTCGAAAGGGTGATTGTGGTAAGGATGATGACGGAAGGTTGATTAGGAGGAGGTTTTTCTGTAATAAGGCAAGATTGAGGGAGCATAAACACTACAACCGAGTTGATAGGTGGCAGGAGCACAAGCCTGAGACCCGCACAAATTGTGATGCAAAGTTATCAATTTACCTTGATAGCAACATCAGTGTTTGGAGGGTTAGGAAGGTGATATTGGAGCATAATCATGATCTGAAACCGACAAGAATGGTGCATATGATACCAAATTTTAGGGAAATGACTGAATCAGCAAAGGCACAAATTCATGGGATGCAGGCTCATGGAGTCCCGACATCTAAAATATTAGGGTATATGGCTGGCCAGGCGGGTGGTTATTCCTTCATGGGGTTCAGTAAGAAGAATGCATATAACTATGTTAACCAGAGTAAGCATGCCAAGATAGTGGATGGGGATTCTAATGCCGCAATCGTATACCTAGAGGGAAAGGCAGTTGTAGGCCCAATGAGCATGTCAAGATACAATTTAACTAAGGATAACATGTTGGCAAACATGttttgggccgacggagGTTATGCGCGTGGCATATGGAAAAATGTCACTGTGAATGTTAAAGATGCTGGGTTGCGTCAACTTTTCAAAAAGTGGTTGTATGCTGATATGGAGATCGAGGATTTTGAAGAAGAGTGGGCAGCAGCTATGGAGGAGCATGCTTTGCATGACACCTTTTGGTTTAGGGAAACTTATAAGAAGAGAAGCATGTGGGCCAATGCATAG 1278 0.4421 MVIDDVLHGDDGRLVTEGQQQLSDSGSLRHRGGSWNNSEFTQIPLPSIATTFLQLPSINQRLPSLAAHVTVEHVAYLARSPLQSLAFAHLAVTHLYGCILYMEALSIDCTTDVNNEFEWSSEDEIDDVEGLEYEDILGLTAGDIMRMVFCSDDGAYEFYRVFGKFHGFGIRKGDCGKDDDGRLIRRRFFCNKARLREHKHYNRVDRWQEHKPETRTNCDAKLSIYLDSNISVWRVRKVILEHNHDLKPTRMVHMIPNFREMTESAKAQIHGMQAHGVPTSKILGYMAGQAGGYSFMGFSKKNAYNYVNQSKHAKIVDGDSNAAIVYLEGKAVVGPMSMSRYNLTKDNMLANMFWADGGYARGIWKNVTVNVKDAGLRQLFKKWLYADMEIEDFEEEWAAAMEEHALHDTFWFRETYKKRSMWANA 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01594 425 Pfam FAR1 DNA-binding domain 157 247 IPR004330 -
Aip09g01594 425 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 143 357 IPR031052 GO:0006355
Aip09g01594 425 PANTHER OS03G0181600 PROTEIN 143 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01594 Aip-Chr9 32529801 32535742 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip09g01594 FAR1 2.6e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01594 - - ahf:112758792 331.257