Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip09g01578 | ATGAAAGAAAGGAAATGGACGCGATGCCTCACCACAACAACAACCACCTCTCATCCCTCAAATCCTTCTTCATCCCTTCTTCTTCCGCCCAGAATTGTCCATAATGTCTGGAAAGACATAATCCTAACCCCCTCTCAAAGAGACCCACCTCACCATAAGCACCACCCGTTCGAAGAAATGACCCTTAAGGCTCTCCTCTCAAAAAATGCTGCCGTCATTGGTGACGACGTCATCTCTATTGTTTCTCTTTATAATCATCATCCTGTTCCTCATCGGTTCCTGCAGGTGCCCGCCGTTGAAAGCTCATCCTCCTCCGCAGCTGCTTGGTCCAGGGAACGCAAACAGGGATTAAAGATTGGATTTAGAACAGTGTGTGGAAATGGCAAGGCCCCGAAAAGATTAAATGCTTCACTTGGATGGCTACCCACCAAAAATTACTCACAGCACAAAGGAGAGCGCATTTCCTTAGTTTGGACTCTAGCTGCCATCGATGTAAAGGAGTGCCTGAAACTATACAACATGTTTTACGAGATTGCCCAACGACATCCAGGTTATGGGAATAAAGAACTCTTCTCACCACCCTACCAAACATCCCACAATGAACATGTTATAGTTCTGAACCATGCTTATACTATTAAGATAGCTTTCGAAAAATCTGGCCTAACCCCTCAAGGAAGAAGGCACAGAAAAGTCCATGTAGCGTGGAGTTACCCACCTGAAAATTGGATAAAACTTAATATGGACGGTGCAGCATCAACAAATCCGAATGCAGGAGGATGCGGGGGTGTTATTAGGAATGAGCAAGGAAGATGGGTGGCTGGTTTTATGGCCAATCTAGGATGCTGTTCGGCATTTCGGGCAGAAATGTGGGGCATCTATCATGGATTAAAAATTGTTTGGGATCTAGGCTTAAGAAGGATTATAGTGGAGTCAAATTCAACAACAGTAGTCACTATACTTAACAAGAAGGAGGGGTTGCACTCCCATCCTAAACCTCTTGTGAGAAGCATTGCGAACTTGATGCAAAAGAATTGGGAACTAAGAATAGAAAATATATACAGAGAGGGCAACAGATGTGCGCATTGGCTGGCCAAAGAAAGTTTAAAATCACCATCAGGATttccatttctgtttctgcttctcccagAAAGACCCCTTACAGAGAAAGGTATATGGAAGTTAGATACATGGGATTGGACTGAGACGCTGAATGAAAAGTTCCAGAGATGTTGGGTAGAAGAATCTCGGAGGTTGAAACCTTGGCTTTTAAGAGCATTGAATGCAAGCCTTGGTGGGAGGTTTTGGTGGGGAGGATTTTGGAAGATTGGAAATGATCTCTCCCAGTTTTTGGGCCCACTAATATTGAATCAGCTGCTAGAGTCTATGCAAAATGGTGATCCAGCCTGGATTGGATACGTTCTTGCCTTCTCAATATTTGTTGGAGTGGTCTTTGGGGTGTTATGTGAAGCTCAATATTTTCAGAATGTCATGCGTGTTGGATTCCGGCTAAGATCAACACTGGTAGCTGCTGTATTTCGCAAATCATTAAGGCTTACCCATGAAGCTCGAAAGCAATTTGCATCTGGAAAAATAACCAACTTGATGACTACTGATGCCAAAGCACTTCAGGCATGGTTTCCTTCTATTCAAATATGTCAGTCACTTCATACTCTGTGGTCAGCTCCGTTCCACATTACCATTGCCATGGTTCTTCTTTATCAACAACTAGGAGTTGCTTCCCTTTTGGGCGCTTTGATGCTAGTCCTTATGTTTCCATTACAGCAGACATTTATCATCAGTAGAATGCAGAAGTTGTCTAAGGAAGGATTACAACGTACAGACAAGAGAATTGGCCTTATGAATGAAGTTTTGGTAGCTATGGACACTGTAAAATGTTATGCATGGGAGAGTAGTTTCCAGTCTAAAGTTCAGAATGTCCGAGATGATGAATTATCATGGTTTCGAAAAGCATCATTACTTGGAGCGTTAAATGGATTCATACTGAATAATATTCCAGTTTTTGTAACTGTGATTTCATTTGGAATGTTCACCTTACTTGGAGGGAATTTGACACCCGCAAGAGCTTTTACATCACTTTCTCTGTTTGCTGTGCTTCAGTTTCCTCTTTTCATGCTTCCTAATATTATAACTCAGAAGAGAGAATACTTTTTACCAAATCCACCGCTTGAGCCAGGATTACCAGCCATCTCAATCAAAAACGGAAACTTCTCCTGGGATTCCAAGGCAGAAAGGCCTACATTGGCAAACATAAACTTGGATATACCTGTTGGTAGCCTAGTTGCAGTTGTTGGAAGTACAGGAGAAGGGAAAACATCACTAGTATCTGCAATGCTTGGAGAACTTCCTGCAGTTGTAGGTTCAACTGTTGTTATGAGAGGGACAGTTGCTTATGTACCCCAAGTCTCTTGGATTTTTAATGCAACTGTGCGGGATAATGTTTTATTTGGTTCTGCCTTTGACCCAATAAGATATGAAAGGGCAATAGATGTGACTGAACTACGACATGACCTTGAGTTACTGCCTGGTGGTGATCTTACCAAAATTGGAGAAAGAGATGCGCATGTCGCTAAACAGGTTTTTGATAAATGCATCAAGGGAGAATTGAGAGGGAAGACCCGAGTTCTTGTTACAAATCAACTGCATTTCCTTTCACAGGTGGATAGAATCATTTTGATCCATGAAGGTACTGTGAAAGAGGAGGGAACATTTGAGGAGCTCTCTAACCAGGGGCCATTGTTCCAAAAGCTTATGGAAAATGCTGGAAAGATGGAGGAGTATGAAGAAGAAACGGTAGATACTGAAACTGCTGATCCAAAGTCCTCTTCAAAACAGGTGGCCAATGGAGAACTTAATGATACTGCAAAGAGTGGGAGTAAGGCAAAAGAAGGAAAATCTGTCCTTATTAAACAGGAAGAACGGGAAACAGGTGTTGTCAGTATGAAAGTTTTAGCAAGATACAAGACTGCATTAGGAGGTCTTTGGGTGGTTGTAATACTCTTTGGATGCTATTTCTTAACAGAGGTGTTACGAATTTCAAGTAGCACATGGTTGAGCCATTGGACTGATCAGAGTGCTTCAGTGGGCTATGATCCTGGATTTTATAATCTGATATATGCAGCTCTATCATTTGCTCAGGTTATGGTGACTTTAACAAATTCTTATTGGTTGATCATATCAAGTCTATATGCAGCCAGAAGGTTTGCAAAGGATTTAGGTGACATTGATCGTAATGTTGCCCCATTTGTCAATATGTTTCTGGGTCAAGTGTCTCAGCTCCTTTCAACATTCGTCCTGATAGGGATTGTCAGCACAATGTCCTTGTGGGCAACAATGCCGTTGTTGGTACTGTTTTATGGAGCATATCTCTACTATCAGAGCACCGCCCATGAAGTAAAGTGCTTAGATTCAATTAGTAGATCCCCTGTTTATGCACAATTTGGAGAAGTACTTAATGGCCTATCAACAATTTGTGCTTACAAAGCTTATGACGGCATGGCTGATATCAATGGAAAGTCGATGGACAACAACATACAATTCACTCTGGTGAACATGAGTGGAAATCGATGGCTTGCAATTCGATTAGAAACGCTGGGAGGTCTCATGATATGGTTTACTGCAGCCTTTGCGTCGGGACCCGCTTTGAACGTTAACAGTTTGCTTACTGGTGTGTTCAGGCTTGCTAGTTTGGCTGAGAATAGTCTAAATGCTGTTGAGCGTGTTGGCACTTATATAGATTTGCCTTCAGAGGCACCATCCATCATTGAGGATAGTCGCCCCCCTCCAGGCTGGCCCTCATCTGGATCAATCGGATTTGAGGATGTTGTACTTCGATACAGGCCTGAACTTCCTCCTGTCCTTCATGGCTTGAATTTCACAATTTTTCCAAGCGATAAGTTTGGGGTCTCTGATTTGTGTAAAGTTCTTGGCATTATACCACAGTCCCCTGTTTTGTTTTCAGGAACTGTAAGGTTTAATCTTGACCCTTTTAATGAACACAATGATGCTGACCTCTGGGAGGCTCTGGAGAGGGCACATTTGAAGGATGTCATTCGGAGGAATTCTTTGGGGCTGGATGCTGAGGTCTCTGAGGCAGGCGAGAACTTCAGTGTTGGGCAGAGGCAACTGTTGAGTCTCTCTCGGGCATTATTGCGTAGATCAAAGATATTAGTACTTGATGAAGCCACTGCAGCAGTAGATGTTAGAACAGATGCCCTCATACAGAAAACAATTCCAGAGGAATTTAAATCGTGCACCATGATCATCATTGCTCATCGTCTTAACACCATCATAGACTGTGATCGGATTCTTTTGCTTGATGGTGATAAGGTTCTTGAATATGATACCCCTGAAGAACTGCTATCAAATGAAGGCAGTTCGTTCTCTAAGATGGTGCAAAGTACAGGAGCCGCAAATGCCCAATATCTACGCAGCTTAGCATTCAGGAGTAAGTCAGATAGGGAAGAGAGTAAGCATAATGATGGCCAGAAAAAATGGCTTGCTTCGTCTCGCTGGGCTGCTGCAGCTCAATTTGCCCTTGCCGTCAGTCTCACCTCATCACAGAATGACCTGAAAAGATTGGAAGTGGAAGAAGAGAATAGCATACTCAAGAAAACAAGGGATGCTGTGATAACTTTGCAGGGGGTTTTGGAAAGGAAGCATGATAGAGAAATCGAGGAATCTTTAGACCGATACCAAATATCCTCGGACAGTTGGTGGTCATTACTCTACAAGATGATTGAAGGTCTTGCAATGATGAGCAGACTGGCCAGGAGCAGGCTTCATCAATCAGACTTTGATTTTGATGATAGATCAATTAACTTTGATCAAGTTGATATGTAG | 4860 | 0.4243 | MKERKWTRCLTTTTTTSHPSNPSSSLLLPPRIVHNVWKDIILTPSQRDPPHHKHHPFEEMTLKALLSKNAAVIGDDVISIVSLYNHHPVPHRFLQVPAVESSSSSAAAWSRERKQGLKIGFRTVCGNGKAPKRLNASLGWLPTKNYSQHKGERISLVWTLAAIDVKECLKLYNMFYEIAQRHPGYGNKELFSPPYQTSHNEHVIVLNHAYTIKIAFEKSGLTPQGRRHRKVHVAWSYPPENWIKLNMDGAASTNPNAGGCGGVIRNEQGRWVAGFMANLGCCSAFRAEMWGIYHGLKIVWDLGLRRIIVESNSTTVVTILNKKEGLHSHPKPLVRSIANLMQKNWELRIENIYREGNRCAHWLAKESLKSPSGFPFLFLLLPERPLTEKGIWKLDTWDWTETLNEKFQRCWVEESRRLKPWLLRALNASLGGRFWWGGFWKIGNDLSQFLGPLILNQLLESMQNGDPAWIGYVLAFSIFVGVVFGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRLTHEARKQFASGKITNLMTTDAKALQAWFPSIQICQSLHTLWSAPFHITIAMVLLYQQLGVASLLGALMLVLMFPLQQTFIISRMQKLSKEGLQRTDKRIGLMNEVLVAMDTVKCYAWESSFQSKVQNVRDDELSWFRKASLLGALNGFILNNIPVFVTVISFGMFTLLGGNLTPARAFTSLSLFAVLQFPLFMLPNIITQKREYFLPNPPLEPGLPAISIKNGNFSWDSKAERPTLANINLDIPVGSLVAVVGSTGEGKTSLVSAMLGELPAVVGSTVVMRGTVAYVPQVSWIFNATVRDNVLFGSAFDPIRYERAIDVTELRHDLELLPGGDLTKIGERDAHVAKQVFDKCIKGELRGKTRVLVTNQLHFLSQVDRIILIHEGTVKEEGTFEELSNQGPLFQKLMENAGKMEEYEEETVDTETADPKSSSKQVANGELNDTAKSGSKAKEGKSVLIKQEERETGVVSMKVLARYKTALGGLWVVVILFGCYFLTEVLRISSSTWLSHWTDQSASVGYDPGFYNLIYAALSFAQVMVTLTNSYWLIISSLYAARRFAKDLGDIDRNVAPFVNMFLGQVSQLLSTFVLIGIVSTMSLWATMPLLVLFYGAYLYYQSTAHEVKCLDSISRSPVYAQFGEVLNGLSTICAYKAYDGMADINGKSMDNNIQFTLVNMSGNRWLAIRLETLGGLMIWFTAAFASGPALNVNSLLTGVFRLASLAENSLNAVERVGTYIDLPSEAPSIIEDSRPPPGWPSSGSIGFEDVVLRYRPELPPVLHGLNFTIFPSDKFGVSDLCKVLGIIPQSPVLFSGTVRFNLDPFNEHNDADLWEALERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLSRALLRRSKILVLDEATAAVDVRTDALIQKTIPEEFKSCTMIIIAHRLNTIIDCDRILLLDGDKVLEYDTPEELLSNEGSSFSKMVQSTGAANAQYLRSLAFRSKSDREESKHNDGQKKWLASSRWAAAAQFALAVSLTSSQNDLKRLEVEEENSILKKTRDAVITLQGVLERKHDREIEESLDRYQISSDSWWSLLYKMIEGLAMMSRLARSRLHQSDFDFDDRSINFDQVDM | 1619 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip09g01578 | 1619 | ProSitePatterns | ABC transporters family signature. | 1375 | 1389 | IPR017871 | GO:0005524 | |
Aip09g01578 | 1619 | PANTHER | ABC TRANSPORTER C FAMILY MEMBER 11-RELATED | 383 | 858 | - | - | |
Aip09g01578 | 1619 | MobiDBLite | consensus disorder prediction | 931 | 965 | - | - | |
Aip09g01578 | 1619 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 435 | 721 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Aip09g01578 | 1619 | CDD | ABC_6TM_ABCC_D2 | 1003 | 1251 | IPR044726 | GO:0140359 | |
Aip09g01578 | 1619 | Gene3D | ABC transporter type 1, transmembrane domain | 412 | 722 | IPR036640 | GO:0005524|GO:0016021 | |
Aip09g01578 | 1619 | Gene3D | ABC transporter type 1, transmembrane domain | 966 | 1257 | IPR036640 | GO:0005524|GO:0016021 | |
Aip09g01578 | 1619 | PANTHER | ABC TRANSPORTER C FAMILY MEMBER 11-RELATED | 859 | 1308 | - | - | |
Aip09g01578 | 1619 | PANTHER | ABC TRANSPORTER C FAMILY MEMBER 11-RELATED | 1305 | 1491 | - | - | |
Aip09g01578 | 1619 | CDD | RNase_H_like | 245 | 365 | IPR044730 | - | |
Aip09g01578 | 1619 | Pfam | ABC transporter transmembrane region | 438 | 709 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Aip09g01578 | 1619 | Pfam | ABC transporter transmembrane region | 1072 | 1217 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Aip09g01578 | 1619 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 383 | 858 | - | - | |
Aip09g01578 | 1619 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 1004 | 1217 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Aip09g01578 | 1619 | Pfam | ABC transporter | 754 | 843 | IPR003439 | GO:0005524 | |
Aip09g01578 | 1619 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1267 | 1464 | IPR027417 | - | |
Aip09g01578 | 1619 | SUPERFAMILY | ABC transporter transmembrane region | 1000 | 1256 | IPR036640 | GO:0005524|GO:0016021 | |
Aip09g01578 | 1619 | MobiDBLite | consensus disorder prediction | 8 | 25 | - | - | |
Aip09g01578 | 1619 | SUPERFAMILY | ABC transporter transmembrane region | 420 | 718 | IPR036640 | GO:0005524|GO:0016021 | |
Aip09g01578 | 1619 | Gene3D | - | 859 | 952 | IPR027417 | - | |
Aip09g01578 | 1619 | Gene3D | - | 731 | 858 | IPR027417 | - | |
Aip09g01578 | 1619 | ProSiteProfiles | RNase H type-1 domain profile. | 239 | 369 | IPR002156 | GO:0003676|GO:0004523 | |
Aip09g01578 | 1619 | Pfam | Reverse transcriptase-like | 246 | 366 | IPR002156 | GO:0003676|GO:0004523 | |
Aip09g01578 | 1619 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1199 | 1472 | IPR003439 | GO:0005524 | |
Aip09g01578 | 1619 | Gene3D | - | 241 | 369 | IPR036397 | GO:0003676 | |
Aip09g01578 | 1619 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Aip09g01578 | 1619 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 738 | 926 | IPR003439 | GO:0005524 | |
Aip09g01578 | 1619 | Pfam | ABC transporter | 1313 | 1403 | IPR003439 | GO:0005524 | |
Aip09g01578 | 1619 | Gene3D | - | 1304 | 1474 | IPR027417 | - | |
Aip09g01578 | 1619 | MobiDBLite | consensus disorder prediction | 944 | 961 | - | - | |
Aip09g01578 | 1619 | SUPERFAMILY | Ribonuclease H-like | 241 | 371 | IPR012337 | - | |
Aip09g01578 | 1619 | CDD | ABC_6TM_ABCC_D1 | 436 | 718 | IPR044746 | GO:0140359 | |
Aip09g01578 | 1619 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 733 | 925 | IPR027417 | - | |
Aip09g01578 | 1619 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 859 | 1308 | - | - | |
Aip09g01578 | 1619 | PANTHER | ATP-BINDING CASSETTE SUB-FAMILY C | 1305 | 1491 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip09g01578 | Aip-Chr9 | 32331315 | 32365201 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip09g01578 | 736 | 954 | Calmodulin-binding Proteins | AT2G36910 | 22.509 | 9.66e-13 | 71.6 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip09g01578 | - | - | gmx:100801762 | 1984.15 |