Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01557 ATGTGGAATTCTGAAGAGGATGATGAGAGAACTGATGAGGTGGTGGTTGAGGAGAGTGGGAAGAAGAAGAAGAAGAAGAAGGGGATGCCGTCCAAAAATCTTATGGCGGAGAGGCGGCGAAGGAAGAAGCTCAATGATAGGTTGTACATGCTTagAGTTTCGATACTTGGAGATGCAATTGACTACATGAAGGAGCTACAGCAGCGGGTCAATGATCTTCAAAATGAACTGGAGTCAACTCCAACTAGCTGTTCGCCATCATCTTCCACCAGCATTCAACCTTTGACACCCACACTGCAAACCCTTTCTTGCCGGGTGAAGGAAGAACTGTGTCCGATGCCAATCCCAGGAAACCAAACAGCAAAGGTGGAAGTTAAGGTAAGGGACGGTAAAGCTATCAATATTCACATGTTTTGTAGCCGCCGACCAGGTCTTCTGGTCTCTACAATGCAGGCTCTGGATAACCTCGGATTAGATGTTCACCAAGCTGTTATTAGCTGCTTCAATGGTTTTGCTTTAGACATCTTTAAAGCTGAGCAATGCAGAGAAGGGCAAGATGTGCTTCCTGAGGAAATCAAAGCAGTTCTGCTGGATTCAGCAGGATCCAAATAA 612 0.4575 MWNSEEDDERTDEVVVEESGKKKKKKKGMPSKNLMAERRRRKKLNDRLYMLRVSILGDAIDYMKELQQRVNDLQNELESTPTSCSPSSSTSIQPLTPTLQTLSCRVKEELCPMPIPGNQTAKVEVKVRDGKAINIHMFCSRRPGLLVSTMQALDNLGLDVHQAVISCFNGFALDIFKAEQCREGQDVLPEEIKAVLLDSAGSK 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01557 203 MobiDBLite consensus disorder prediction 1 40 - -
Aip09g01557 203 PANTHER BHLH TRANSCRIPTIONAL FACTOR 19 202 - -
Aip09g01557 203 MobiDBLite consensus disorder prediction 14 40 - -
Aip09g01557 203 Coils Coil 56 83 - -
Aip09g01557 203 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 31 87 IPR036638 GO:0046983
Aip09g01557 203 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 19 202 - -
Aip09g01557 203 SMART finulus 34 72 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01557 Aip-Chr9 31113780 31118454 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01557 29 179 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 71.341 7.34e-80 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01557 - - ahf:112779394 338.576