Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01534 ATGAATCAAAAGCATAACATTCCCAAAATCAACGGTGATATAAGCAACTCCAATGAAAACAATAATAGCCTTGTGCAACATGAGACAGAGAAAGAGTATCTGATGCTTGGTTTACAAGTGTTATTGGGAGGTATAAAGGATGAGTTATCTGAAGTAAAGAAAGCAGCAATAATTGATCATCAGAATTTCATTAGGATGTTATACATTCTCAATGCTCGTGTTAGCGAAATTCGAGAGATTGTAACCAAATGTTGTGGCGAGAACAATGAGAGAGGTGGATTTGTTAAGGAAATGAAAGGGTTTGTAGAGGAATGTGAGGAGGAGCTTAAAGTTGTGAAAGATGAACACCTTAGGATCATGGAGCTTGTGAAGAAAACCAATGAGTATTATCTAGGAGGTGGAGGAGGATCAAACCCCTTTGAACTGTTTCTTATTGTGAGAGATCTTGTGCATGAAGAACCCCCCTCGCTCATCATGGACGATCGCACAAGCAGCGGCCATGACTTCCACCTTGCGTTTGGATGA 525 0.4019 MNQKHNIPKINGDISNSNENNNSLVQHETEKEYLMLGLQVLLGGIKDELSEVKKAAIIDHQNFIRMLYILNARVSEIREIVTKCCGENNERGGFVKEMKGFVEECEEELKVVKDEHLRIMELVKKTNEYYLGGGGGSNPFELFLIVRDLVHEEPPSLIMDDRTSSGHDFHLAFG 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01534 174 Coils Coil 95 115 - -
Aip09g01534 174 PANTHER FORMIN-RELATED 2 150 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aip09g01534 174 Pfam Formin Homology 2 Domain 43 150 IPR015425 -
Aip09g01534 174 PANTHER FORMIN-LIKE PROTEIN 2 150 - -
Aip09g01534 174 MobiDBLite consensus disorder prediction 1 20 - -
Aip09g01534 174 Gene3D Formin, FH2 domain 19 152 IPR042201 -
Aip09g01534 174 SUPERFAMILY Formin homology 2 domain (FH2 domain) 43 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01534 Aip-Chr9 29704975 29705499 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01534 15 150 FH2 protein (formin) Gene Family AT1G70140 43.262 1.07e-28 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01534 - - aip:107618940 278.87