Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01528 ATGAGAAGCTCAACGCGGATCCCAAAGAACGCTAATGGCTTGGCCACAAACTACCCTTCACAAACACTGCCTCATGTCTCAGATTGTAATTCTCTTTATCATCAATTTGGTGATGAGTTTCATTCATGGCCAGCACCGGTCGAAATGGTGACCGGAGACAGAGCTGCTAGTGCTTCCAAGAGCCACAGTCAGGCCGAGAAGCGGCGCAGAGACCGGATCAGTGCACAGCTTACAAGTCTAAGGAAACTAATTCCAAAATCTGATAAGCTTGCAAGCCATGCTGGGAATGTTTGCCCCGACATGGGTTAA 309 0.4854 MRSSTRIPKNANGLATNYPSQTLPHVSDCNSLYHQFGDEFHSWPAPVEMVTGDRAASASKSHSQAEKRRRDRISAQLTSLRKLIPKSDKLASHAGNVCPDMG 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01528 102 Gene3D - 50 95 IPR036638 GO:0046983
Aip09g01528 102 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 57 102 IPR011598 GO:0046983
Aip09g01528 102 PANTHER TRANSCRIPTION FACTOR BHLH30 29 91 IPR045847 GO:0003700|GO:0006355
Aip09g01528 102 MobiDBLite consensus disorder prediction 1 21 - -
Aip09g01528 102 Pfam Helix-loop-helix DNA-binding domain 60 86 IPR011598 GO:0046983
Aip09g01528 102 PANTHER TRANSCRIPTION FACTOR BHLH51 29 91 - -
Aip09g01528 102 MobiDBLite consensus disorder prediction 52 72 - -
Aip09g01528 102 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 58 89 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01528 Aip-Chr9 29525643 29528074 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01528 36 90 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G40200 52.632 1.55e-10 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aip09g01528 HLH 1.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01528 - - adu:107469423 140.969