Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01521 ATGCCGGCGCCCTTCTCCAACGCTGTCCAGGAGAACATGAGCAACCCCGTCGAGGTAAGCACCACAAATGGTCAGTCGTGGAGCATCTCCTGGGTTGTCGAGGAGGAGCATCTGCATCGAATCGTCTTCACCGGAGGGTGGCGAGCCTTTTACGAACACTACCGTCTTCGAATCGGAAACACAATGCTATTTTCGTATCACCAACCAAAGTTTTTCTACGTGGCCATCCATGACGCAAGATACTGCGAGATCAACTATGGAAGAAACTTGCGTAACGGAAGTCTTCCAGCAATCCCCGCACATGGCAACTATACAGTCCAGTTCTTCGCGATAATCCCGATGCTCCCGCTACGGTTCTCGCGGGATTATGGCTGGTCCCTACCGCGACCCCTGACCCTAACCACGCCTACAAGACATCATCATCGCGTGGGCTGGAATATGGAACCTAATGGAAGGATCGTGCTTCATGGAGGATTGGACGCTGTCCGGGAACACTACGGCCTAAGGGATCAGTGGCTGGTGCTGTTCCGTTATCACGAAGCTCAAAACACCATGTATGTCATGTTCTTCAACGGTCATACAATGGAAATCAACTACTTGGCCCATGCCGAGCCGGGGACGGACTCCACTTGTATAAACTACCCGACGGCCCCCAAGTCAAGGCACATAGCCGATGGGTTCAGATCGACCAATCCCTTCTTTGTTAGTCCAATCGTGCACAGACTGCCAACCCGTTTTCTACCAAATGTCCCCCCTCTGCCGGGAGTATACGAGAATAGCCCAATTTCGATTACCAATGAGAGGGGCGTGTGGACCGTTCAGTATACGCACTATGTCGGGAGGACGAACGGATGTTTTGGAATGGGCTGGAGTGTCTTAGCAACAACATGTCAACTAAGACACGGCCATGTATGTGTCTTCGAGCGGCTGGTGCCGCAGGACTACCGGCTGCATATATATTGA 963 0.5234 MPAPFSNAVQENMSNPVEVSTTNGQSWSISWVVEEEHLHRIVFTGGWRAFYEHYRLRIGNTMLFSYHQPKFFYVAIHDARYCEINYGRNLRNGSLPAIPAHGNYTVQFFAIIPMLPLRFSRDYGWSLPRPLTLTTPTRHHHRVGWNMEPNGRIVLHGGLDAVREHYGLRDQWLVLFRYHEAQNTMYVMFFNGHTMEINYLAHAEPGTDSTCINYPTAPKSRHIADGFRSTNPFFVSPIVHRLPTRFLPNVPPLPGVYENSPISITNERGVWTVQYTHYVGRTNGCFGMGWSVLATTCQLRHGHVCVFERLVPQDYRLHIY 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01521 320 Gene3D - 1 82 IPR015300 -
Aip09g01521 320 Gene3D - 217 320 IPR015300 -
Aip09g01521 320 SUPERFAMILY DNA-binding pseudobarrel domain 230 319 IPR015300 -
Aip09g01521 320 PANTHER B3 DOMAIN-CONTAINING 103 203 - -
Aip09g01521 320 PANTHER B3 DOMAIN-CONTAINING 2 87 - -
Aip09g01521 320 ProSiteProfiles B3 DNA-binding domain profile. 1 80 IPR003340 GO:0003677
Aip09g01521 320 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 103 203 - -
Aip09g01521 320 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 2 87 - -
Aip09g01521 320 SUPERFAMILY DNA-binding pseudobarrel domain 1 86 IPR015300 -
Aip09g01521 320 SUPERFAMILY DNA-binding pseudobarrel domain 113 191 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01521 Aip-Chr9 29237546 29238808 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01521 1 86 B3 DNA Binding Superfamily AT3G18990 27.907 2.32e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01521 - - ahf:112746889 558.525