Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01520 ATGTCTGACGGAGCAGAGCACGGAGTTGGATCGTTTGAGGGCGAAGGCTCTGCACGGATGGAGTCGGACAAGTACGACTTTCAGGAAGATGAAACAGAACACGACCGTCATGCAGAGGCCGATGTCGACAATGGGGATGCGGTTGAATTGGAAGACAGTTTGGACGGCGCCGGAGGAATGTCTGACAATTATGCGGAAGACGAGTTTTACGTTGTTGATTCCGTGGAGTCGATAGGTTGGATTGATTTTTTGAACTTGAGCGAGGAGGATGTTTTCCGGTTTAATTTCGCAGACGTTGACATTGCATTTGAGTTCTACCAGCAATATGCAAAGCACCATGGCTTCGGGGGGAGACGTTCCAGAAGCGAAAAACGCGGCGAAGTAAGGATACGGCAGGAGTTCGTGTGCCACCGACAAGAGTACCGATCCCCGAAGTTCTACTCGATGCCTAACCGGCAAAAGAGGCCGAGGGCCGAGACACGTTGTGGATGCCCTGCAAGGATGCTACTCCGCATGGATGATGAATCAGGACGTTGGCTCGTTGCGTACTTTTCAGACATGCATAACCACCACGTTCTTGAGTTGCGATTTTCTTCCATGCTTCCAAGCCATCGGAGGATGAGCGAAGCGGACATCGAGCAGATGAACGACATGCGCAAAGGGGGCATTGGCGTCTCCCGAATCCACGGTTTTATGGCAAGCCTAGCGGCGGGTATCATAATGTCCCCACTGTACTACAAGGAAGTTGTTGACGGTGAGGGCGTGTTGCAACATTTGTTTTGGTGTGACGGCACCAGCCAAATTGATTACCAGGTGTTTGGAGACGTGGTTGCATTTGATGCAACGTATAAGAAAAACGTTTACCTTTCACCTCTTGTAGTATTCTCCGGTGTGAATCACCACAACCAAACGGTTGTCTTTGCCGCCGCAATAGTGGCAGACGAGAAAGAAGAGACCTATGTCTGGCTGCTTCAACAGTTGCAAACTTCAATGAAAGGGAAGGCTCCCGTGTCCATAATAACCGACGGTGACATGCAAATGAAGTCTGCGATCGAGCAAGTTTTTCTGGAGGCTCACCATCGACTTTGCGCTTGGCATCTACTCCGAAACGCCACGAGCAACATCGGAAAGCCCAAATTCACCAGGATGTTTAGGGATTGCATGCTTGGTGACTACGAGGTCCGAACATTCGAGAGAAAGTGGTTTGAGATGGTTGAGAAATTTGGCGTCGCCGATAAAAGATGGGTACAGGACATGTACGAGAGAAGGCACAGTTGGGCCACAGCACACATACGGGGAAAGTTTTTTGCCGGATTTCGAACAACGTCAAGGTGCGAGGGCTTGCACGCTGTGATATCACGGTATGTTAAGTCTCGATACAGCTACACTGAGTTTTTACGTCATTTCCAGCGATGCTTGATGTTCGTGCGTGCAAAGGAGGTGGAGGCTGATTTCGAGTGTGCAAAGGGTGACCCTGTTATGACTACCAACCTGAAACAGCTGGAGCGGAGTGCAGCCGAGAACTACACTCATGCAATATTCTATTTGTTTGTTCCCATTCTTGACAAGGCCTGTGCAATGAGGGTGGTTGACTCTGAAGACAACGGTTCCTATTTTATCCACACCGTCTCGCGATACGGCACTCCGGGGAAGGATTGGCGTGTTGTTGCAACGTCTGATATGAGGCAGGTCCGATGCACGTGCATGAGAATGGAATATTTCGGGGTCCCCTGCGAACATATAATTGCGGTTCTTGTTCTTAACAATGTTCATGAGATCCCGAGGTCTTTGATATTGCCGAGATGGACCAAGGAtaggggtggcaaacgggccttaatccgccgggccggcccgcATTTGCAGCTGCCTCACTCTCACGTCTCACTTCTCTCAGTCACTCAGAACTCAGTCGTCTCGTCTCCAGTCTCCTCGACGACTCTTAGCCTCTCACTCGGTTCCTCAGTCTCAGTTCCTCAGTTCCTCATCGTCAGTTCCTCACTCGGTCATCCTCAGCTCCTCACCGTCACTCTCAGTCTCTCACTTCCATCGTCCATCGACCTGAGCTCGAACTTCAGAGTTCCATCCTCACCCCTGACGGTCGCTGAGTCGGAGTCAGTTCCTCACCGTCGATCTTCGGTCGTCGTCGCTGCTGCCTGCTGGTCTCGGTCCTGGCTCCTGGGTCTCGTGAGTCGTGACTTGTCCTCTGACTCTGCTGGTCTCATTCTCGGTCACGGCTGCTCCACGCTCTGGGTCTTGTGTTTTGGGCTGTTTTGTGCTCTGATCCTTCAAGGTCTCCACTCTCCACAACTCTAA 2313 0.5011 MSDGAEHGVGSFEGEGSARMESDKYDFQEDETEHDRHAEADVDNGDAVELEDSLDGAGGMSDNYAEDEFYVVDSVESIGWIDFLNLSEEDVFRFNFADVDIAFEFYQQYAKHHGFGGRRSRSEKRGEVRIRQEFVCHRQEYRSPKFYSMPNRQKRPRAETRCGCPARMLLRMDDESGRWLVAYFSDMHNHHVLELRFSSMLPSHRRMSEADIEQMNDMRKGGIGVSRIHGFMASLAAGIIMSPLYYKEVVDGEGVLQHLFWCDGTSQIDYQVFGDVVAFDATYKKNVYLSPLVVFSGVNHHNQTVVFAAAIVADEKEETYVWLLQQLQTSMKGKAPVSIITDGDMQMKSAIEQVFLEAHHRLCAWHLLRNATSNIGKPKFTRMFRDCMLGDYEVRTFERKWFEMVEKFGVADKRWVQDMYERRHSWATAHIRGKFFAGFRTTSRCEGLHAVISRYVKSRYSYTEFLRHFQRCLMFVRAKEVEADFECAKGDPVMTTNLKQLERSAAENYTHAIFYLFVPILDKACAMRVVDSEDNGSYFIHTVSRYGTPGKDWRVVATSDMRQVRCTCMRMEYFGVPCEHIIAVLVLNNVHEIPRSLILPRWTKDRGGKRALIRRAGPHLQLPHSHVSLLSVTQNSVVSSPVSSTTLSLSLGSSVSVPQFLIVSSSLGHPQLLTVTLSLSLPSSIDLSSNFRVPSSPLTVAESESVPHRRSSVVVAAACWSRSWLLGLVSRDLSSDSAGLILGHGCSTLWVLCFGLFCALILQGLHSPQL 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01520 770 PANTHER OS02G0262500 PROTEIN 244 603 - -
Aip09g01520 770 PANTHER OS02G0262500 PROTEIN 93 228 - -
Aip09g01520 770 ProSiteProfiles Zinc finger SWIM-type profile. 553 589 IPR007527 GO:0008270
Aip09g01520 770 SMART 26again6 564 591 IPR006564 GO:0008270
Aip09g01520 770 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 244 603 IPR031052 GO:0006355
Aip09g01520 770 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 93 228 IPR031052 GO:0006355
Aip09g01520 770 Pfam MULE transposase domain 276 370 IPR018289 -
Aip09g01520 770 MobiDBLite consensus disorder prediction 1 59 - -
Aip09g01520 770 Pfam FAR1 DNA-binding domain 104 193 IPR004330 -
Aip09g01520 770 MobiDBLite consensus disorder prediction 17 44 - -
Aip09g01520 770 Pfam SWIM zinc finger 562 585 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01520 Aip-Chr9 29228924 29231627 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip09g01520 MULE 7.9e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01520 - - ahf:112770447 1106.28