Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01513 ATGGCTCCCAAATCCAAATCCAAATCCAAAGCCAAAGCCAAAACCCCAAAACCCTCTCCTTCCTCCTCCTCCAAGTCCTCCTCCTCATCCTCCATCTTCAAACCTGGCACGAGAGTCGAGGTCAGCTCCGATGACGACGGATTCCGTGGTTCTTGGTTCTCCGGCACCGTCATCCGCCGCGCTGGTGCGGACAAATTCACGGTCGAGTACGACAACCTCTTGGCCGACGAGCGGGGCAAAAAGAAGCTGAGGGAGCAGCTCGGCTTCCACCAGCTTCGGCCGCTTCCTCCGGAGGAGGCCGGCGTCGAATTCAAGTTCGGCGATGAGGTTGACGCGTTCCACAACGACGGTTGGTGGGAGGGGAGTATCACGCAGGAGCTGGAGAATGGTATGTTCGCTGTTTATTTCAGAGGGTCGAAGGAGCAGATCGAGTTTACCGCGGACCAGCTGAGGAAACATCGCGAGTGGATGAATGAGAAGTGGGTTCCGCCGTTTGCGCAGCAAGAACAAGAAGAGAATATGGTGTCAGACCCAAATGCAAAGTCTGATAAAACTGTGAAAGGGAAAGAAGTGGTGGCGACACCAAATGTGACGTCTGATGATAAAGATGTGAAAGGGAAGGGAGTGATGTTGACACCAAATGTGTCATCTGATGATGAAGGGAAGAAAGTGGTGTTGACACCAAATATAAAGTCTGATGAAACTGCAGAAGAGTTCAATTTTTGTGAAGGGATGCTGGTTGAGGTAAGCAATGATGAGGAAGGTTTCCAAGGAGCTTGGTTTTCTGCCACTGTTGTTGAAGTAATTGGAGACGATAGGTTCCTTATAGAGTACAAGACCCTGCTGGACGATAATTCGAATCTTTTGAGAGAGGAGGCTGATAAGTGGCACATAAGGCCCCCTCCCCCAGCAACTTCTGAGAACATTAAATTCAGTTATCTTGAAGAAGTGGATGCTATGTACAACGATGGATGGTGGGTTGGTGTAATTTCCAAAGTTCTTGGCGACTCAAAGTACGTAGTTTACTTCAGGAGCTCCAATGAAGAAATAGAGTTTCCGAACTCCCAGTTGAGGCCACATCTGGACTGGATTGGCGGCAAGTGGGTCTTGGCTTCTGAGGCGTTGAACTTGTTGTGA 1137 0.4978 MAPKSKSKSKAKAKTPKPSPSSSSKSSSSSSIFKPGTRVEVSSDDDGFRGSWFSGTVIRRAGADKFTVEYDNLLADERGKKKLREQLGFHQLRPLPPEEAGVEFKFGDEVDAFHNDGWWEGSITQELENGMFAVYFRGSKEQIEFTADQLRKHREWMNEKWVPPFAQQEQEENMVSDPNAKSDKTVKGKEVVATPNVTSDDKDVKGKGVMLTPNVSSDDEGKKVVLTPNIKSDETAEEFNFCEGMLVEVSNDEEGFQGAWFSATVVEVIGDDRFLIEYKTLLDDNSNLLREEADKWHIRPPPPATSENIKFSYLEEVDAMYNDGWWVGVISKVLGDSKYVVYFRSSNEEIEFPNSQLRPHLDWIGGKWVLASEALNLL 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01513 378 SMART agenet_At_2 102 158 IPR014002 -
Aip09g01513 378 SMART agenet_At_2 309 365 IPR014002 -
Aip09g01513 378 SMART agenet_At_2 239 306 IPR014002 -
Aip09g01513 378 SMART agenet_At_2 31 100 IPR014002 -
Aip09g01513 378 Gene3D - 25 79 - -
Aip09g01513 378 MobiDBLite consensus disorder prediction 197 220 - -
Aip09g01513 378 MobiDBLite consensus disorder prediction 14 37 - -
Aip09g01513 378 MobiDBLite consensus disorder prediction 1 48 - -
Aip09g01513 378 Pfam Agenet domain 317 360 IPR008395 -
Aip09g01513 378 Pfam Agenet domain 244 303 IPR008395 -
Aip09g01513 378 Pfam Agenet domain 36 97 IPR008395 -
Aip09g01513 378 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 14 373 - -
Aip09g01513 378 Gene3D - 227 311 - -
Aip09g01513 378 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 14 373 - -
Aip09g01513 378 MobiDBLite consensus disorder prediction 168 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01513 Aip-Chr9 28895123 28898226 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01513 253 363 PHD Transcription Factor Family AT5G58610 28.788 5.84e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01513 - - lja:Lj5g3v1529970.1 410.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01513 09 28895123 28898226 Aip09g01513 09 28895123 28898226 ECH