Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01511 ATGCTACTGGTAACGCTAACCCCTAAATCAATGCAATTCGCGATTCCTTCTCTACTCGCGGAGAAGCATTCCCTCTCTGTGTTCCTCCCTAGTCGCAGTTTGTCGTGTTTGTCCCTACTGGCCTTGTTGTCCTCTCTTCGTGTTCCTCTGTACTCGCGGTTCGTCATGCTAGTCAGTTTTGAGCTTCGATCATCACTGTTCGTTGTCTTCATCTCTAAACTCTTCGATTTTACTGGCGTTTGTTCATCACCACTGGTCACTGTTCTGCAGATTCTCATGTTCGATCATTACTGCTCGCCCTTCATCTCTGATTTCTTCCAATTTGCCGGCGTTCTTCTGCTAGTATTCACCATTGCCAGTCACTATTCTACAGATGTGATTATATCCACATTTGACTATGGTAGTGGCTCTATTAGTGCCTATGCAATTACGTTCACTTTTTTTTTCTGCTTCTCTCTTTTTGAAAATTTTAAATATAGACTTGGGAAAAGCCAACCACAACTTGAAATCTGTTTTGGCAACAACAAACATGAAGCACCTCTAAGCATTGTGCAGTTTCAAACAAATAATAATCTGCAAGCACTCACATTGTCCATGGGAAGTGGTAGTAATAAGGATTCATCAACAACCAGCTGTGACAATAACAGCATTATTGAAGCCCCACCTTCTAATGGAAGAACTCTAGATACCTTTGGCCAGAGAACTTCAATATACCATGGCGTAACAAGACATAGATGGACTGGAAGATATGAAGCTCATCTTTGGGATAATAGCTGTAGAAGGGAAGGACAATCAAGAAAAGGTCGCCAAGTGTATTTGGGTGGATATGATAAAGAAGATAAAGCAGCTAGGGCTTATGATTTGGCTGCATTAAAGTATTGGGGGACATCCACTACTACCAATTTTCCTATCATGTATTTAAAATACTAA 930 0.4108 MLLVTLTPKSMQFAIPSLLAEKHSLSVFLPSRSLSCLSLLALLSSLRVPLYSRFVMLVSFELRSSLFVVFISKLFDFTGVCSSPLVTVLQILMFDHYCSPFISDFFQFAGVLLLVFTIASHYSTDVIISTFDYGSGSISAYAITFTFFFCFSLFENFKYRLGKSQPQLEICFGNNKHEAPLSIVQFQTNNNLQALTLSMGSGSNKDSSTTSCDNNSIIEAPPSNGRTLDTFGQRTSIYHGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEDKAARAYDLAALKYWGTSTTTNFPIMYLKY 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01511 309 ProSiteProfiles AP2/ERF domain profile. 237 303 IPR001471 GO:0003700|GO:0006355
Aip09g01511 309 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 185 305 - -
Aip09g01511 309 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 185 305 - -
Aip09g01511 309 SMART rav1_2 237 309 IPR001471 GO:0003700|GO:0006355
Aip09g01511 309 Gene3D AP2/ERF domain 237 305 IPR036955 GO:0003700|GO:0006355
Aip09g01511 309 CDD AP2 236 304 IPR001471 GO:0003700|GO:0006355
Aip09g01511 309 SUPERFAMILY DNA-binding domain 236 304 IPR016177 GO:0003677
Aip09g01511 309 Pfam AP2 domain 238 295 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01511 Aip-Chr9 28645906 28649997 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01511 166 304 AP2-EREBP Transcription Factor Family AT1G51190 62.420 1.61e-56 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aip09g01511 AP2 8.2e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01511 K09285 - cit:112495878 200.675