Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01499 ATGGGCGTTGTTTGCGGGAATTCAGAACCGACGATTGAGATTAAAGATCTGAAATTCACGTACCCCGGCATCGACGGTCACCCTCCGCCGGGCTCCGCTCCTCTCATTCAGGACTTCTCTCTCTCACTCTCTTCCGGCGATCGATGCCTCCTTGTTGGATCCAATGGCGCTGGGAAGACGACGATTCTCAAGATATTGGGAGGGAAGCACATGGTCGAACCGGGAATGGTTCGTGTGCTTGGAAGATCGGCTTTTCATGACACCAATTTGACGTCCTCTGGTGATCTCTGTTATCTTGGTGGCGAGTGGAGGCGAGATGTTGCTTTCGCGGGTTATGAGGTTGCAATACAAATGGATGTTTCTGCTGAAAAGATGATATTTGGTGTGGCTGGGACTGATCCTGAAAGAAGAGCAGAGCTAATCAAGGTATTGGATATAGATCTCTCTTGGAGATTGCATAAAGTATCTGATGGTCAAAGAAGAAGAGTTCAAATTTGTATGGGTCTCCTCAAACCATTCAAGGTTCTTCTACTCGATGAGATAACAGTCGACCTTGATGTTCTAGCAAGAGCTGACCTTTTGAAGTTCCTAAGAAAGGAATGTGAAGAGAGGGGTGCTACTATTATATATGCAACACATATATTTGACGGTCTTGAGGATTGGCCAACTAATATAGTTTATGTAGCGCATGGAAAGCTGCAATTAGCCATGCCTATTGATAAAGTCAAGGAAACTAGCAAACTGTCATTAATGGTTTGTTCTGTTCCTAATCTTGACATTGGAAGTTCCTTATAA 795 0.4465 MGVVCGNSEPTIEIKDLKFTYPGIDGHPPPGSAPLIQDFSLSLSSGDRCLLVGSNGAGKTTILKILGGKHMVEPGMVRVLGRSAFHDTNLTSSGDLCYLGGEWRRDVAFAGYEVAIQMDVSAEKMIFGVAGTDPERRAELIKVLDIDLSWRLHKVSDGQRRRVQICMGLLKPFKVLLLDEITVDLDVLARADLLKFLRKECEERGATIIYATHIFDGLEDWPTNIVYVAHGKLQLAMPIDKVKETSKLSLMVCSVPNLDIGSSL 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01499 264 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 12 255 IPR003439 GO:0005524
Aip09g01499 264 PANTHER ATP-BINDING CASSETTE ABC TRANSPORTER-RELATED 9 252 - -
Aip09g01499 264 Pfam ABC transporter 37 182 IPR003439 GO:0005524
Aip09g01499 264 PANTHER ABC TRANSPORTER I FAMILY MEMBER 20 9 252 - -
Aip09g01499 264 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 249 IPR027417 -
Aip09g01499 264 Gene3D - 9 253 IPR027417 -
Aip09g01499 264 SMART AAA_5 45 232 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01499 Aip-Chr9 28205241 28208949 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01499 12 209 Calmodulin-binding Proteins AT2G36910 24.186 9.72e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01499 K12608 - egr:104456885 442.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01499 09 28205241 28208949 Aip09g01499 09 28205241 28208949 ECH