Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01497 ATGCATAATGAAGCTCTTTGTGGCAAACCTCAGTTTTTAGTGCCTCCATGTGCTAACCGAGTTGGGAAAAAGATCAAGGAAAAAGCTGCTTCTGAAATGCATACTGCCCATAGTTCTTTCAATAATTTTGGTGGTTGCATTCATAACAGTTCTACAGAGGAAAAGAAAAATGGGGTAAATCAAAATGAAAAGAATTCATCATCCACTTTAGGAGCACTAAGAAAGGTTGCCATTAAAGTGCTTCATTTGGACTTGGAAAATACTTCAAAGAGATTTGAGGTAGAATGCAATGCAATGTGCAATCTACGCCATCGCAATCTTGTTAAGATTATCAGCAGTTATTCCAATAATCTTGATTTCAGATCCTTGGTGATGGAGTTCATGTCAAACGGAAGCCTTGACAAATGGTTATTCTCAGATAACTATTGTTTGAATTTCTTACAAAGCCGAAAACAAGACTGCCTCTCTAATAACCTCAAGGTTCAAAAACGCTGCCGCCCTGTCAAGAGTTTCAAGCCACCGCCTGTCACTGCACGCAACTTTTCCAGGACGCCGCCAGTCTCTGACCACTGCTGTGCCGCTACAATACCTGGCGCGCTTTTCTCTCCGGTTGTGATACTTTCATGGTCGTCCAGAGTTTCGACAAGACACCGCTGA 657 0.4201 MHNEALCGKPQFLVPPCANRVGKKIKEKAASEMHTAHSSFNNFGGCIHNSSTEEKKNGVNQNEKNSSSTLGALRKVAIKVLHLDLENTSKRFEVECNAMCNLRHRNLVKIISSYSNNLDFRSLVMEFMSNGSLDKWLFSDNYCLNFLQSRKQDCLSNNLKVQKRCRPVKSFKPPPVTARNFSRTPPVSDHCCAATIPGALFSPVVILSWSSRVSTRHR 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01497 218 Pfam Protein tyrosine and serine/threonine kinase 73 140 IPR001245 GO:0004672|GO:0006468
Aip09g01497 218 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 68 149 - -
Aip09g01497 218 Gene3D Transferase(Phosphotransferase) domain 1 53 161 - -
Aip09g01497 218 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 68 149 - -
Aip09g01497 218 SUPERFAMILY Protein kinase-like (PK-like) 74 148 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01497 Aip-Chr9 27954359 27956692 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01497 74 140 Receptor kinase-like Gene Family AT3G47110 50.000 7.98e-14 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Aip09g01497 PK_Tyr_Ser-Thr 1.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01497 - K13420 mtr:MTR_0070s0020 117.087