Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01484 ATGGGTTCTGATCTGAAAGTTGAATTGTCCAAGAAAACTCCAATTTTTGGTATTAAGGTTTGGGAAGTAATTGGAATTGCGGTTGGATTATTCATTATAGTGATCCTTTGTGTGCTCTCATTTTGCCTTAGTTCAAGGAAGAAGTCTAAAAAGGATAGAGATAACAAGGTTCCTGTTAGTCAAATACCCACCGTGTCGAAGGAAATCAAGGAGGTGAGGGTTGAGCAAGTGCCGGCGAATGGATTCGTCCCGCGAGATGGAATACTCCTCACTATTCATGATAAGTCCAGTGACAGAGAATCAGACAAAGTTATGGTTCACTTGGGTGTGGGGAAAATGAAGCATGGGGATAGTGGCAGCCACTCAGATTCATTTCATCACTTGGAGAAAGATGGATATGGATCACAGTCAGGGGAAGAAGGCAGCTCCGGCACGTTTAAAGCAGCATACAATCCGTCTTCTTCGTATCCTATTACAGCCCCTTCGCCTCTGTCTGGCCTTCCAGAATTCTCTCACTTGGGTTGGGGTCACTGGTTTACATTGAGGGATCTTGAACTTGCCACAAACCGGTTTTCGAAGGAGAATGTCCTTGGTGAAGGTGGCTATGGAGTTGTTTATAGGGGACAGTTGATAAATGGGACTTCAGTGGCAGTTAAGAGGATACTCAATAACATTGGTCAAGCAGAGAAAGAATTTAGGGTTGAAGTTGAAGCTATTGGCCATGTTCGACATAAAAATTTAGTTCGTCTTTTGGGGTATTGCATTGAGGGGACTCACAGGATATTAGTGTACGAGTATGTTAACAATGGAAACTTAGAGCAATGGCTTCATGGAGCAATGCGTCATCATGGATATCTTACCTGGGAAGCGCGTATCAAGATTCTTCTGGGCACGGCTAAAGCGCTTGCTTATTTGCATGAAGCAATTGAACCGAAGGTTGTACACCGAGATATCAAGTCGAGCAACATATTAATTGATGACGACTTCAATGCCAAGGTTTCTGATTTTGGCCTGGCCAAGTTACTGGGTGCTGGGAAGAGTCATGTTACAACAAGAGTTATGGGAACCTTTGGATATGTGGCTCCTGAATATGCAAATACTGGCCTTTTAAATGAGAAGAGTGATGTTTATAGTTTTGGTGTTGTGCTGCTCGAAGCAATTACCGGAAGAGATCCAGTCGACTATGGCCGTCCACCACAGGAAGTTAATCTGGTTGACTGGTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAACATTGAGGTGA 1311 0.4127 MGSDLKVELSKKTPIFGIKVWEVIGIAVGLFIIVILCVLSFCLSSRKKSKKDRDNKVPVSQIPTVSKEIKEVRVEQVPANGFVPRDGILLTIHDKSSDRESDKVMVHLGVGKMKHGDSGSHSDSFHHLEKDGYGSQSGEEGSSGTFKAAYNPSSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKENVLGEGGYGVVYRGQLINGTSVAVKRILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRILVYEYVNNGNLEQWLHGAMRHHGYLTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVVLLEAITGRDPVDYGRPPQEVNLVDWLXXXXXXXXXXXXXXXXXXXXXXXXXTLR 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01484 436 MobiDBLite consensus disorder prediction 114 134 - -
Aip09g01484 436 ProSiteProfiles Protein kinase domain profile. 191 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g01484 436 SMART serkin_6 191 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g01484 436 Pfam Protein kinase domain 192 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip09g01484 436 SUPERFAMILY Protein kinase-like (PK-like) 165 402 IPR011009 -
Aip09g01484 436 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 3 409 - -
Aip09g01484 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 313 325 IPR008271 GO:0004672|GO:0006468
Aip09g01484 436 ProSitePatterns Protein kinases ATP-binding region signature. 197 219 IPR017441 GO:0005524
Aip09g01484 436 Gene3D Transferase(Phosphotransferase) domain 1 267 419 - -
Aip09g01484 436 MobiDBLite consensus disorder prediction 114 146 - -
Aip09g01484 436 Coils Coil 408 408 - -
Aip09g01484 436 CDD STKc_IRAK 197 408 - -
Aip09g01484 436 PANTHER OS01G0323000 PROTEIN 3 409 - -
Aip09g01484 436 Gene3D Phosphorylase Kinase; domain 1 173 266 - -
Aip09g01484 436 Coils Coil 434 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01484 Aip-Chr9 27437677 27441665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01484 132 407 Trihelix Transcription Factor Family AT1G70460 50.903 2.88e-84 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Aip09g01484 Pkinase 5.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01484 - - gmx:100787014 709.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00845 06 11472498 11477460 Aip09g01484 09 27437677 27441665 ECH
Aip09g01484 09 27437677 27441665 Aip09g01484 09 27437677 27441665 ECH
Aip09g01484 09 27437677 27441665 Aip06g00845 06 11472498 11477460 PCT