Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01473 atgccaccgacggaaaaagggactgatgccgccgtcacaTGCCTCGCCGTTGCCGTCGATTTCGCCAGGAGAAGATGCATGGAGAGAAGAGCCGAGCTTCTTCCTATCCTCTCAGAACCCATCCTCTCAGATCCTATCCTCTCAGAGCTTCTTCCTCTCTCCGTCCACGTTCTCTCCATCACAGGAGCTTCTTTCACCGCCGCCGCTCTCTCCATCGCTCCGTCCACGATCTCATCACTGACAGCAACTTCCATTCGCTGGTCATCCTCATCCACCGGTTCAGGAGGGTCAAATAATAATGCTTTTCAAATGCAAGCGGAGATTCAATTGCTTTCGCCACTCGTTCCTGTTCATCAATTGAGCTTCCTCAGGTTGCTGGTCCATCATGGGCACCCTTTGCTTCTTAGATCACTGATATATGATCACCAGCATCACATGGGCCTTCTCATAATGGAGAGAAGGGAATTGGCTTCCAAGTATGAGCAAGTTAAGACCTTGGCTGAGTCTTCTGAGTTAATGCATAAACATGATTCAGCCATGACTAAATCTGCTTTAACTGAAGCACGACAACGCGAAGAAAGTTTGAAGAAGACAGTCAGAGGCGAACTCGCAATGTTGAAAATGCAATTCTCACAGTGGATAGAGCAAGCTTCTGAACCCAACAAGGAAGCAGTTATTAAAGCATTGCTAGGTGCAAAAGAAGCTATGCTTGGGATTAGATATCATATGCGCCTAATGGGTGAGGCTGCAGGTGTTCCTATTGAACCAGAACCACAAACAAAACTTTTAGATGCTACACTGAACTTGGAAGGAGTGTTGTTGGCTGGAGTTCCAGGAGCAGGAGGATTTGATGCTGTCTTTGCTGTTACTTTTGGAGATTCAAGCAGCAATGTGATGAAAACATGGAGCTCACTCAATGTTCTTGCCCTTCTGGTTAAAGAAGATCCTTGTGGCGTTTCTTTAGAAAGTGTTGACCCTAGAACAAATGAAATCACTTCAGCTttgtgCGAGGGGGAGAGAACTGTCGTTGCGTCTGCTGCAGGCTCGCCATCGTCGCCACCGTGGAGCCGCGAGGAGGTGGAAGCCATCAAAAGAATTGCTGAGTATGTTGCTCAACTGAAAAAGAGTTGGGAAAGGACATGTACAGCTCAACGGCGAGCTCCATCGAACAAGACAGATTTAGGAGCAATGATGGAAACTGGCAGAATGCAGAATGGAGCTGAACAGGGCAGAACGCAAAGCAAAATCTCAATAGTGGCAAGACGGCTCTACCCAGCTTCTGTGATGTCATCCTTGAGCTCCATGGTGACACCCTCAATCGACAATAGCTTGGTGGCACTAGAGGCGGCAGATATGGTCTCCAGGGGAGACAGCGGTGATGGCTTCTTCCTCTTGTTCACTGGCTCACGTCTCTCTCTCCCTCTCACTTCCCTCTCTGGGTTGGCGATGGCGGAGAAGACCTAG 1464 0.4706 MPPTEKGTDAAVTCLAVAVDFARRRCMERRAELLPILSEPILSDPILSELLPLSVHVLSITGASFTAAALSIAPSTISSLTATSIRWSSSSTGSGGSNNNAFQMQAEIQLLSPLVPVHQLSFLRLLVHHGHPLLLRSLIYDHQHHMGLLIMERRELASKYEQVKTLAESSELMHKHDSAMTKSALTEARQREESLKKTVRGELAMLKMQFSQWIEQASEPNKEAVIKALLGAKEAMLGIRYHMRLMGEAAGVPIEPEPQTKLLDATLNLEGVLLAGVPGAGGFDAVFAVTFGDSSSNVMKTWSSLNVLALLVKEDPCGVSLESVDPRTNEITSALCEGERTVVASAAGSPSSPPWSREEVEAIKRIAEYVAQLKKSWERTCTAQRRAPSNKTDLGAMMETGRMQNGAEQGRTQSKISIVARRLYPASVMSSLSSMVTPSIDNSLVALEAADMVSRGDSGDGFFLLFTGSRLSLPLTSLSGLAMAEKT 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01473 487 PANTHER - 210 335 - -
Aip09g01473 487 Pfam GHMP kinases C terminal 237 290 IPR013750 -
Aip09g01473 487 PANTHER - 210 335 IPR035102 -
Aip09g01473 487 ProSitePatterns Cyclic nucleotide-binding domain signature 1. 452 468 IPR018488 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01473 Aip-Chr9 27102092 27113062 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01473 74 129 Homeobox Transcription Factor Family AT3G61150 50.000 3.26e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01473 K00938 - aip:107639303 232.261