Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01461 ATGGAAGGTATTGTTGTGAGAAGGGTCATTCCCTCGGATAACAGTTGCCTTTTTAATGCAGTTGGATATGTGATGGATCGTGATCAAACGAAAGCAGCTGAGCTGAGACAGGTTATAGCTGCAACAGTAGCAAGTGATCCGCAGAAATATTCTGAAGCATTTCTTGGGAAGCCGAATGCAGAGTACTGTAACTGGATTCTTGACACAGAGAAATGGGGAGGTGCGATTGAACTTTCAATATTGGCGGATTATTATGGACGGGAGATTGCTGCATATGATATCCAAACATCAAGATGTGACTTGTATGGTCAGGAAAAGGGTTATTCAGAAAGGGTGATGCTTATTTATGATGGTCTCCACTATGATGCTTTAGCTGTGTCGCCCTTTGAGGGTGCTCCCGAGGACTTCGATCAGACGATATTTACCGTACAGAAAGACAGAAGCATTGGACCTGTTGAGGGGCTTGCTCTTAATTTTGTTATGGACCAACAGAGGAAGAGGAGATTCACCGACACCGCCAACTTCACCTTGCGCTGTGGTGTATGTCAAATCGGAGTTGTTGGTCAGAAGGAAGCTGTGGAGCATGCACAAGCAACCGGTCATGTTAACTTCCAAGAGTATAGATGA 627 0.4482 MEGIVVRRVIPSDNSCLFNAVGYVMDRDQTKAAELRQVIAATVASDPQKYSEAFLGKPNAEYCNWILDTEKWGGAIELSILADYYGREIAAYDIQTSRCDLYGQEKGYSERVMLIYDGLHYDALAVSPFEGAPEDFDQTIFTVQKDRSIGPVEGLALNFVMDQQRKRRFTDTANFTLRCGVCQIGVVGQKEAVEHAQATGHVNFQEYR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01461 208 Pfam OTU-like cysteine protease 12 107 IPR003323 -
Aip09g01461 208 Gene3D - 1 173 - -
Aip09g01461 208 ProSiteProfiles OTU domain profile. 5 127 IPR003323 -
Aip09g01461 208 PANTHER UBIQUITIN THIOESTERASE OTU1 6 206 - -
Aip09g01461 208 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 6 206 IPR039138 GO:0004843|GO:0016579|GO:0030433|GO:0101005
Aip09g01461 208 SUPERFAMILY Cysteine proteinases 8 124 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01461 Aip-Chr9 26630070 26630729 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01461 1 208 C2H2 Transcription Factor Family AT1G50670 83.173 6.85e-133 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01461 K13719 - gmx:100499809 388.267