Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01454 ATGAGCAGGTGGTCTCAGATTGCAGCACGGTTACCGGGAAGAACCGACAATGAGATAAAGAATCTATGGAACTCTTGCCTCAAGAAGAAGCTGAGGCAAAAAGGGATTGACCCAATCACAAACAAGCCACTCTCCGATGTGGTGCCTATTGAGAATAACAAGAACAAGAAGGAGGAGGAGGAGAAGCCACCAACAACAACAGAAAGGTTTGAAGGGCCTCCTTCTGATTCTGTAGGAGGATACTTTTCCTTCAATTATCAGCAAATGATGAACAATTTTGGAGCAACTCCACAAAACGCCACATCTTCCTCCGCCGTCGGATCGAGTGACACTAACTTTGTTGCTAACAACATTCTAACATGGGAACAAGAAGAGGTAAAATGGTGCGAGTATCTTAACACCCTTTTGCTCAACAACACGGTAGTTCAGAATCATTCTTCTTCTTCTTCTCATTCTGTTATGTATGGTGGTGGTGGTGAGGTTATTACTAAGCCAGAAACAACAAGCTTCATGAGACAAGACTCATCAAGTAGTAGTTGGCACCACCATAGCCAGCAACAACCTCATCAATTCTCAGATATGTATACCAAGGATCTGCAGAGATTTTCAGTGGCTTTTGGCCAATCCATGTAG 633 0.436 MSRWSQIAARLPGRTDNEIKNLWNSCLKKKLRQKGIDPITNKPLSDVVPIENNKNKKEEEEKPPTTTERFEGPPSDSVGGYFSFNYQQMMNNFGATPQNATSSSAVGSSDTNFVANNILTWEQEEVKWCEYLNTLLLNNTVVQNHSSSSSHSVMYGGGGEVITKPETTSFMRQDSSSSSWHHHSQQQPHQFSDMYTKDLQRFSVAFGQSM 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01454 210 Gene3D - 1 68 - -
Aip09g01454 210 SUPERFAMILY Homeodomain-like 2 36 IPR009057 -
Aip09g01454 210 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 31 IPR017930 -
Aip09g01454 210 PANTHER HOMEODOMAIN-RELATED 115 203 - -
Aip09g01454 210 PANTHER HOMEODOMAIN-RELATED 3 69 - -
Aip09g01454 210 CDD SANT 3 24 IPR001005 -
Aip09g01454 210 MobiDBLite consensus disorder prediction 170 190 - -
Aip09g01454 210 ProSiteProfiles Myb-like domain profile. 1 27 IPR001005 -
Aip09g01454 210 MobiDBLite consensus disorder prediction 51 67 - -
Aip09g01454 210 PANTHER MYB DOMAIN PROTEIN 55 3 69 - -
Aip09g01454 210 PANTHER MYB DOMAIN PROTEIN 55 115 203 - -
Aip09g01454 210 MobiDBLite consensus disorder prediction 37 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01454 Aip-Chr9 26363145 26364802 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01454 3 207 MYB Transcription Factor Family AT1G57560 36.652 2.21e-23 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01454 K09422 - psom:113347076 97.4413