Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01433 ATGGGTTTGAATAAATTTGAATTCGTTAGGTTAAGGcttaggcttggtttgCTCGCTTCTGATCCTTTCCCTGCGCCGTGGTCGTTCTCTGATCCTCTCCATCTGCGGGATTGCTTGTTCTCCCCTGTATGGTGCTTGTTCTCTGATCGTCGACGCCGCAACACGCTGCCGCCGCCACCGCTACACTCGGGTCCACCACTTCATTGTTTTCTATCGCCTCTCTGTTCCTCTTCTTCACCAGTGACTCTGATCTCTGTCCTTCTCCATCCACCTCTGCCTCTGCCTCTGCAACCTACTCCTTTAAGTTATGTTGCACCGGAGTATGCATGCACTGGAATGTTGACTGAGAAGAGTGATGTGTATAGCTTTGGGATACTTATTATGGAAATAATTACCAGAAGAAGTCCCGTTGATTATAGTAAACCCCAAGGAGAGGTTAATTTAATTGAGTGGTTGAAAGCTATGGTTGGAAATAGAAAATCAGAGGAACTCATTGATCCGAACCTTTCTGAAAAGTCATTTTCAAAGGCTCTTAAGCTTTGCTCTGTTGGTTGCTCTTAA 561 0.4439 MGLNKFEFVRLRLRLGLLASDPFPAPWSFSDPLHLRDCLFSPVWCLFSDRRRRNTLPPPPLHSGPPLHCFLSPLCSSSSPVTLISVLLHPPLPLPLQPTPLSYVAPEYACTGMLTEKSDVYSFGILIMEIITRRSPVDYSKPQGEVNLIEWLKAMVGNRKSEELIDPNLSEKSFSKALKLCSVGCS 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01433 186 Pfam Protein tyrosine and serine/threonine kinase 98 142 IPR001245 GO:0004672|GO:0006468
Aip09g01433 186 PANTHER BRASSINOSTEROID INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 101 180 - -
Aip09g01433 186 SUPERFAMILY Protein kinase-like (PK-like) 99 179 IPR011009 -
Aip09g01433 186 Gene3D Transferase(Phosphotransferase) domain 1 89 184 - -
Aip09g01433 186 PANTHER OS01G0323000 PROTEIN 101 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01433 Aip-Chr9 25465297 25467094 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01433 101 172 Trihelix Transcription Factor Family AT5G38560 46.053 7.32e-19 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Aip09g01433 PK_Tyr_Ser-Thr 3.3e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01433 - - ahf:112778339 239.58