Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01425 ATGGCATCTTCATTCTCAACTCAATTGCTGCAAAGTCAAATTCTACTTCCCCGTTTTCATCATCTCCAGGTTGTCTGTAGCAGTATCGGATCACGGATTGGTTACAACCAAACACTGGCTTCAAGATCACACTATGCTGTGAGGTTTTCTGTCACACAACAATCTGAAGCAAAATCAATGAGATATAGGAGAATGACATGCATGAACGTCACTGAAAGTGAGCTGCTAGCCAAAGTGACAACTAAGTGCTTCTTCGATGTACAAATTGCGGGTGAACCTGCTGGCAGGATTGTTTTTGGTTTGTTTGGGGACGTCGTTCCTAAAACAGCTGAGAATTTTCGAGCTTTCATCTCATTCATAAAGTTGAATAATTCTTGTGCAGGAGAGAAAGGATATGGCTATAAAGGATCCTACTTCCATCGTATAATCAAAGACTTCATGATTCAAGGCGGGGACTTCACCGAGGGAAATGGAACCGGTGGAGTTAGTATCTATGGTTCTCGTTTTGAAGATGAGAATTTTAACTTGAAGCATGCTGGTCCTGGAATTTTGAGTATGGCAAATGCTGGTCCTGATACCAATGGCAGTCAGTTTTTTATTTGCACCGTACCGACACCATGGCTAGACAATCGCCATGTCGTGTTCGGACAAGTCATTGATGGAATGGATGTTGTGAAGACTCTCGAGTCACTGGAGACGAGCCAGCGTGATAACAGCCCCAAGAAAGCAAGCAAAATCGCTAATTGCGGTGAACTGCCTCTTGATGGTTGA 771 0.4345 MASSFSTQLLQSQILLPRFHHLQVVCSSIGSRIGYNQTLASRSHYAVRFSVTQQSEAKSMRYRRMTCMNVTESELLAKVTTKCFFDVQIAGEPAGRIVFGLFGDVVPKTAENFRAFISFIKLNNSCAGEKGYGYKGSYFHRIIKDFMIQGGDFTEGNGTGGVSIYGSRFEDENFNLKHAGPGILSMANAGPDTNGSQFFICTVPTPWLDNRHVVFGQVIDGMDVVKTLESLETSQRDNSPKKASKIANCGELPLDG 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01425 256 CDD cyclophilin_ABH_like 82 250 - -
Aip09g01425 256 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 139 151 IPR002130 GO:0000413|GO:0003755
Aip09g01425 256 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 210 225 IPR002130 GO:0000413|GO:0003755
Aip09g01425 256 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 197 209 IPR002130 GO:0000413|GO:0003755
Aip09g01425 256 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 182 197 IPR002130 GO:0000413|GO:0003755
Aip09g01425 256 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 101 116 IPR002130 GO:0000413|GO:0003755
Aip09g01425 256 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 134 151 IPR020892 GO:0003755|GO:0006457
Aip09g01425 256 SUPERFAMILY Cyclophilin-like 74 252 IPR029000 -
Aip09g01425 256 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 84 251 IPR002130 GO:0000413|GO:0003755
Aip09g01425 256 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 40 255 - -
Aip09g01425 256 Gene3D - 70 255 IPR029000 -
Aip09g01425 256 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP20-3, CHLOROPLASTIC 40 255 - -
Aip09g01425 256 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 86 250 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01425 Aip-Chr9 25343687 25347153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01425 95 237 U-box Gene Family AT5G67530 43.056 2.06e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01425 K03768 - gmx:100526955 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip09g01425 09 25343687 25347153 Aip09g01425 09 25343687 25347153 ECH