Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01420 ATGCAAAAAAAAATAATCGGTGCAAGACACTATCTAAAAGGTCAACCTTCAGCAAGAGACATTGTTGGGCATGGAACTCACACAGCATCAATTGCAGCAGGGAATAAAGTAGTGGGAGAAAGCTTCTATGGAATTGCCGAAGGAGTTGCAAGAGGAGGTATCCCATCAGCAAGAATTGCTGCTTACAGTATGTGTAGTAAACGAGAGTGCAGAGCTGATGTCATATTGGTTGCTTTTGATGATGCCATTGCCGATGGTGTGGATCTTATCACAATTTTAATTGGGACAGATGAGCAAATGACCTTCGATGAATACATCATAGCAATTGGATCTTTTCAAACAATGGAAAAAAGGGATCTTCACTATAAACGCTGCAGAATCATTGATAACGTTTTGCTTGGCAATGGATTAATGCTTTCGGGGAAGTCAATAAATGGGTTTGCATCAAATGGGACAAAGATTCTATTGATCCATGTAAAGTTTGCTTCAAGTCCAAAATGTCCATCAGACAAAGATACCGAATTTTGTTTTTGTTTGGACCCCAAACGCATAAAGGGAAAAATCGTCTTGTGTAGAACTTCATTTGGTTATTCAGCGGGTCTTGCATCGGGAGCATTTGGCTCAATTTCAATCTCTTACGAATATGAAGCTCAAGTAGTTTCTTATCCTGCATTAGGCATAGATCCAGAGGCTTATGATGTTGCTTTGTCTTATGCAAATTCCACTACCACCCCTTGTGCTGAAATATTGAGTAGTACAGACTTTATAAATAATACTGCTCTAATTATTGCTGAATTCTCTTCTGTAGGACCCAATATGCAAATCAGAGAAATTATGAAGCCAGACATTAGTGCTCCTGGTATAGAAATTTTGGCTGCTTACTCACCTCTTGCACCACCTTCTCAGGATAAAACAGATAAAAGATCTGTGAAATACAACATACTCTCTGGAACCTCAATGTCATGCCCCCATGTTGCTGGTGCAGCTACATATGTTAAGACTTTTCGTCCTGATTGA 1017 0.3943 MQKKIIGARHYLKGQPSARDIVGHGTHTASIAAGNKVVGESFYGIAEGVARGGIPSARIAAYSMCSKRECRADVILVAFDDAIADGVDLITILIGTDEQMTFDEYIIAIGSFQTMEKRDLHYKRCRIIDNVLLGNGLMLSGKSINGFASNGTKILLIHVKFASSPKCPSDKDTEFCFCLDPKRIKGKIVLCRTSFGYSAGLASGAFGSISISYEYEAQVVSYPALGIDPEAYDVALSYANSTTTPCAEILSSTDFINNTALIIAEFSSVGPNMQIREIMKPDISAPGIEILAAYSPLAPPSQDKTDKRSVKYNILSGTSMSCPHVAGAATYVKTFRPD 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01420 338 PRINTS Subtilisin serine protease family (S8) signature 20 33 IPR015500 -
Aip09g01420 338 PRINTS Subtilisin serine protease family (S8) signature 316 332 IPR015500 -
Aip09g01420 338 SUPERFAMILY Subtilisin-like 4 338 IPR036852 GO:0004252|GO:0006508
Aip09g01420 338 ProSitePatterns Serine proteases, subtilase family, serine active site. 317 327 IPR023828 -
Aip09g01420 338 ProSiteProfiles Serine proteases, subtilase domain profile. 1 338 - -
Aip09g01420 338 CDD PA_subtilisin_like 130 249 - -
Aip09g01420 338 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 117 IPR045051 -
Aip09g01420 338 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 126 338 IPR045051 -
Aip09g01420 338 Gene3D Peptidase S8/S53 domain 202 338 IPR036852 GO:0004252|GO:0006508
Aip09g01420 338 Gene3D Peptidase S8/S53 domain 1 120 IPR036852 GO:0004252|GO:0006508
Aip09g01420 338 Pfam Subtilase family 16 337 IPR000209 GO:0006508|GO:0008236
Aip09g01420 338 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 2 117 - -
Aip09g01420 338 PANTHER SUBTILISIN-LIKE PROTEASE SBT4.3 126 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01420 Aip-Chr9 25173187 25174275 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01420 2 337 Subtilisin-like Serine Gene Family AT3G46850 47.453 6.18e-95 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01420 - - ahf:112755736 427.943