Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01418 ATGGCAATGAAGAAGAAGAAGCTGAATTTTTTTGGATTTGCATTTGCATTTGCATGCTTAGTTTGTGGTGTTGTCTCCTATGGATCTGAGCCACTCTCTGTGCTTTCTTTCTTGGAAAACGATGCCGTTTGGGCCAAGCCTTCTTCATTAACAACATACCAACCTCTCATGGTTAATCTCACTCTCATTCATGGAGCTGCTTCTACAGGAGCTGTTTGTTTGGATGGAACATTGCCGGGTTACCACTTGGATCGCGGATTCGGATCTGGTGCGAATAGTTGGCTTGTTCACTTGGAGGGAGGAGGGTGGTGTAATACTGTTAGAAACTGCGTCTACAGAAAAAATACTCGCCGTGGTTCCTCGACATACATGGAAAGTCAAATACAATTCACCGGAATCTTGAGCAATAAGGCAGAAGAAAACCCTGATTTCTTTAACTGGAATAGAGTCAAATTAAGGTACTGTGATGGGGCATCTTTCAGTGGTGATAATGAACTTGAGTCTGAGCAGCTTCAATTCCGAGGACAAAAAATATGGCTAGCAGCAATTGAGGAATTGATGTTCCAAGGAATGCAGACAGCGAACCAGGCACTTCTGTCCGGATGCTCGGCTGGCGGTCTGGCATCTCTAATACATTGCGATGAGTTCCGAAGCTTGTTTCCAGAATCTACCAAGGTTAAATGTTTGAGCGATGCAGGGTTTTTCCTTGATGCAGTTGATGTCTCTGGGAACCGCACACTGAAGAATCTGTTTGAAGGTGTAGTTCAGTTACAGGATGTACAAAAGAACCTGCCCAAAAGTTGCCTTGACCAATTGGATCCAACTTCGTGCTTCTTTCCTCAGAATATGGTCCAACATATTGAGACTCCATTGTTTCTACTCAATGCAGCGTATGATTCGTGGCAGGTCCAAGCCAGTTTAGCCCCACATTCAGCTGACCCGAATGGCTTTTGGAGCGATTGCAAAGCAAACCATGCGAATTGTACCTCGTCTCAGATTCAGTTCCTCCAAGACTTCAGAGATCAATTGCTAAACGACTTGAAAGACTTCGCAAACACACCTCAAACTGGACTATTCATAAATTCTTGTTTTGCTCATTGCCAGTCTGAGAGACAAGAGACATGGTTTGCTGATAACTCTCCCCTACTTGACAACAAGCCAATTGCAGTTGCTGTCGGAGACTGGTATTTCGACCGAGAAGTAGTTAAAGCCATTGACTGTGCTTATCCCTGTGACAATACTTGCCACAATCTGGTGTTTAAGTGA 1266 0.4423 MAMKKKKLNFFGFAFAFACLVCGVVSYGSEPLSVLSFLENDAVWAKPSSLTTYQPLMVNLTLIHGAASTGAVCLDGTLPGYHLDRGFGSGANSWLVHLEGGGWCNTVRNCVYRKNTRRGSSTYMESQIQFTGILSNKAEENPDFFNWNRVKLRYCDGASFSGDNELESEQLQFRGQKIWLAAIEELMFQGMQTANQALLSGCSAGGLASLIHCDEFRSLFPESTKVKCLSDAGFFLDAVDVSGNRTLKNLFEGVVQLQDVQKNLPKSCLDQLDPTSCFFPQNMVQHIETPLFLLNAAYDSWQVQASLAPHSADPNGFWSDCKANHANCTSSQIQFLQDFRDQLLNDLKDFANTPQTGLFINSCFAHCQSERQETWFADNSPLLDNKPIAVAVGDWYFDREVVKAIDCAYPCDNTCHNLVFK 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01418 421 Pfam Pectinacetylesterase 54 401 IPR004963 GO:0016787
Aip09g01418 421 PANTHER NOTUM-RELATED 16 420 IPR004963 GO:0016787
Aip09g01418 421 PANTHER PECTIN ACETYLESTERASE 16 420 - -
Aip09g01418 421 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01418 Aip-Chr9 25146522 25150759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01418 57 421 Carbohydrate Esterase AT1G57590 69.589 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01418 K19882 - gmx:100786972 702.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00797 06 10603464 10608080 Aip09g01418 09 25146522 25150759 ECH
Aip06g00824 06 11122126 11125697 Aip09g01418 09 25146522 25150759 ECH
Aip09g01418 09 25146522 25150759 Aip06g00797 06 10603464 10608080 ECH
Aip09g01418 09 25146522 25150759 Aip09g01418 09 25146522 25150759 ECH
Aip01g02387 01 123168703 123174184 Aip09g01418 09 25146522 25150759 ECH
Aip06g00797 06 10603464 10608080 Aip09g01418 09 25146522 25150759 PCT