LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip09g01382	ATGGAGAGTGAGCAAGACCTAATCGAAACCGTCGCCGTCGCCATCGCCGTCGCCGTGCCGTTGCTACCGCCACTGCCACCGCCACCGCTACAGCCATTCATCTCCTTGATGCTAGCACCAATGCCACCACAACCCATGCCTTCGAACCCCGCCAGCGGCGAAGAAAGCGATGAAAAGCAAAGCTTCTCCTCCAAAAACAAATTCTCTTCCCGCAATTCTTCTTCCAAGTATGATTTCGTTAAGGTGAAGGTGCGGTTAGGTGATAATGCGGATCACTACTATATTCTATTCAGATTTTTGCTCAGTAGGATGCTAACTGTAACCAATATTCCAAATCATGTAGCTATTAAAATTGCTCTTGAACTGAAGAAGCTGCTCATTGACAATAGCCTTCTAGATGTGTATGAATTATTCGGTAACTATTTTAGTGGGTGGATTCCAGAGTGGATAGGCCAAAAGAAAAACCTGCGATTTCTTGATTTCTCTCAAAACTTGTTCTACGAAACCATTCCTTCAAATTTAGGTGGCTCAGCAAAAATATCTGGACAGATCCCTCCACTTGTTGCTAACTTGACAGGGACTTGTCATTTAATAATCTCAGTAGTCCCACTCCAAAAATTTTGGCTAAAAGTTACAGTATTTCAGGAAATAACTTCCTTTGTACATCTCCTTCTGAACATTAAGAAGGAAGAAGAAAAAATTAAATTGCCAACAGAAGATTTTATATCAAGTTCAACCCAAGATGCATCTAGCAGTGGTGAATATGAAACTTCAGGATCGACAGCTGCTAGTGCTTCTGGCCTTCTGGCAATTATGGCGGCAAAATCGGTGGAATTCTCTTATCAAGAACTATCCAAGGCTACAAATAACTTCAGCTCTGATAACAAAACTGGTCAGGGTGGATTCGGAGCTGTTTATTTTGCAGAATTGAGAGGCCAAAAAGCAGCAATTAAGAAGATGGATGTTCAAGCATCAACAGAGTTTCTTTCAGAGTTAAAGGTCTTAACACATATTCATCACTTGAATCTGGTAACTACTTTCTTCTACACACAAAAGGTCGAGTTTCTATGGCATTCAGTGAATCTCAACTTGACTCTGAACAATTTAGTTCATGTTGCTGGAAGTAACCGCAAAAATTTTCCACTCGCTGAATCTCGCATCTGCGTCAATGCATGCGTTCGGAGGATTACGCAATGGTCGTGTCATCGCCGGAACAAGACTCGATCCCCATGGATGACATGGAGTAGTGGTTCAGGCAGAGGATTCGCTTTGCCAGAGAAGATCAAAGACGAAGGATGGAAGCAGCATGGAGAAGCTGGAGAGGTAGAAGACCGATGA	1338	0.4283	MESEQDLIETVAVAIAVAVPLLPPLPPPPLQPFISLMLAPMPPQPMPSNPASGEESDEKQSFSSKNKFSSRNSSSKYDFVKVKVRLGDNADHYYILFRFLLSRMLTVTNIPNHVAIKIALELKKLLIDNSLLDVYELFGNYFSGWIPEWIGQKKNLRFLDFSQNLFYETIPSNLGGSAKISGQIPPLVANLTGTCHLIISVVPLQKFWLKVTVFQEITSFVHLLLNIKKEEEKIKLPTEDFISSSTQDASSSGEYETSGSTAASASGLLAIMAAKSVEFSYQELSKATNNFSSDNKTGQGGFGAVYFAELRGQKAAIKKMDVQASTEFLSELKVLTHIHHLNLVTTFFYTQKVEFLWHSVNLNLTLNNLVHVAGSNRKNFPLAESRICVNACVRRITQWSCHRRNKTRSPWMTWSSGSGRGFALPEKIKDEGWKQHGEAGEVEDR	445

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip09g01382	445	PANTHER	P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 1	56	135	-	-
	Aip09g01382	445	PANTHER	P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN	56	135	-	-
	Aip09g01382	445	MobiDBLite	consensus disorder prediction	44	72	-	-
	Aip09g01382	445	Gene3D	Phosphorylase Kinase; domain 1	271	356	-	-
	Aip09g01382	445	SUPERFAMILY	Protein kinase-like (PK-like)	274	354	IPR011009	-
	Aip09g01382	445	Gene3D	Ribonuclease Inhibitor	85	223	IPR032675	-
	Aip09g01382	445	SUPERFAMILY	L domain-like	120	348	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip09g01382	Aip-Chr9	24304162	24315153	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip09g01382	244	381	Receptor kinase-like Gene Family	AT3G21630	50.714	4.98e-31	124

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-I-1	Aip09g01382		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Aip09g01382	-		K13429	aip:110266799	262.307