Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01381 ATGCTTCCTGTAGGTCCTACTCTTCTTCGCTTGTGCATCGATGCTTCGCCTTCTGCCCCAACGATTCCCAGGTGTTTGCTTCGGTACGACGACAAAACTGTCCTCAAATTTTGGAACTTAAACAAGTGGTTTGGTGAGGGTGAGAAATATGTAAAAGTTGTTTTCTCCCTGGCAAGTAAAATTACACCTAGTGTTATATTTGTTGATGAGGTTGATAACATGTTGGGCCGAAGGGAAAATACTGGGGAGCATGAGGCCATGCGAAAAATGAAAAATGAATTCATGGTGAACTGGGATGGCTTACGTACAAAGGATACCGAGCGAGTTCTTGTGCTTGCAGCCACTAATAGGCCTTTTGACCTTGATGAGGGGTATTCTGGAACTGATCTTAAGAATTTGTGTGTAACTGCTGCGAACCGTCCAATTAAAGAGATATTAGAAAAGGAGAAAAAGGAACATGCTGCTACTCTAGCAGAGGGTAAACCTGCTCCGGCATTAAGTGGAAGTTCCGATATCAGATCACTAAACATAGAAGACTTTAAACATGTTCATCAACAGGTATATCAAGCAGCAATCAAGCTTCCGGGCGATGCCTAA 597 0.4305 MLPVGPTLLRLCIDASPSAPTIPRCLLRYDDKTVLKFWNLNKWFGEGEKYVKVVFSLASKITPSVIFVDEVDNMLGRRENTGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPFDLDEGYSGTDLKNLCVTAANRPIKEILEKEKKEHAATLAEGKPAPALSGSSDIRSLNIEDFKHVHQQVYQAAIKLPGDA 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01381 198 Pfam ATPase family associated with various cellular activities (AAA) 40 123 IPR003959 GO:0005524|GO:0016887
Aip09g01381 198 Gene3D - 119 193 - -
Aip09g01381 198 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 42 123 - -
Aip09g01381 198 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 123 188 - -
Aip09g01381 198 Gene3D - 40 118 IPR027417 -
Aip09g01381 198 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 187 IPR027417 -
Aip09g01381 198 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN-RELATED 42 123 - -
Aip09g01381 198 PANTHER AAA-TYPE ATPASE FAMILY PROTEIN-RELATED 123 188 - -
Aip09g01381 198 CDD AAA 46 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01381 Aip-Chr9 24255726 24259255 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01381 40 124 Calmodulin-binding Proteins AT3G56690 40.230 7.10e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01381 - - aip:107615269 302.753