Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01372 ATGGAGCAACTTCTTGAGAAGGTAGTTTTTGATAGGAATGTGTGTTTTTTCTGGTTGTTGCAGATAATGTCTGTGCAGTCAAGGAGTGACAGCGTTAACACTTCTCTTTTTGACAAAAGGGAGCACATAGAGAAGCTGCATCGTACTTGCAATCTTCTCCGTAAAGTTCAGGTCCCTCCGGTGGGGTTATTTTCCAACTGTCTTGTGCAACAAAAAGTTCTTCATCCATTCCGGAAGCAGAAGTGGAGCAAGGGAAAGCAAAAGGAAAAGGTGAACAACCAGGTGCTGTTTGATCAGGGTACTTATGACAAGCTCCTCTCTGAAGCTCCCAAATTCAAGCTCATCACTCCTTCTATTCTCTCTGATCGTTTGAGGACAAACCCATCTACCATATGCTTATGTTGCCCAAGAGAGTGGACAGCAAATGGGCCCATAGATAAGAACTAG 447 0.4385 MEQLLEKVVFDRNVCFFWLLQIMSVQSRSDSVNTSLFDKREHIEKLHRTCNLLRKVQVPPVGLFSNCLVQQKVLHPFRKQKWSKGKQKEKVNNQVLFDQGTYDKLLSEAPKFKLITPSILSDRLRTNPSTICLCCPREWTANGPIDKN 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01372 148 Pfam S25 ribosomal protein 78 129 IPR004977 -
Aip09g01372 148 Gene3D - 77 131 - -
Aip09g01372 148 PANTHER 40S RIBOSOMAL PROTEIN S25 78 143 IPR004977 -
Aip09g01372 148 PANTHER BNAA04G12260D PROTEIN 78 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01372 Aip-Chr9 24023358 24025971 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01372 88 145 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 72.414 8.09e-21 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01372 K02975 - aip:107618240 185.267