Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip09g01370 ATGGAAAAGACGAAGGTTGCTTCTGCAGTTTCTCTCCTTCTAGTGGTGGGTGTTGCAGTGGGTGTTGTTGCCATTGTCCGCACCAACGACGAGAAAGTCACCGGCACAACCGGTAACGACGGCGGATTAATAAGTACACATAGCAAGGCCGTTAAGGCCATGTGCCAAAACTCCGACGACCGAAGACTATGCCTAGACACACTGAATCCTGTAAACCACACGGATCCAAAAGAGTACATATCAACGGTTGTAAAGAGATCGTTGGAAAGCGTCATCAAGGCCTTTAACATGAGCGATAGGCTCAGATTGGAGCACGATAACAGCACCCCGGGGGTCAAGATGGCCCTCGAAGATTGCAGAGACCTGCTCCAATTCGCCATTGGGGAGTTACAAGCAACAAAAACAGTCCTTCAGGGCAACACAATAAATCACGTACATGATCGCGTCGCCGACCTCAAGAATTGGTTAGGGGCTGTTTTCGCCTTCCAACAATCGTGCCTGGACGGGTTCCACACCCACCACGAGAAGCAGGTTCGGTCGCAGTTGCAAACCGGAAGCTTGGACCACGTTGGGAAGGTTACGGCGTTGGCTCTTGACGTTGTGTCTCGGATTGCACATGTGCTGTCAAATTTTGACTTACACCTTATCGTTAAGCCTTCTTCACGGCGTTTAATTGAGGTTGATCAAGATGGTTACCCGGCTTGGTTCGGCGTTACGGATCGGAAGCTCTTGGGTGACGTCAGCAAGGGAGGTAGCATTGCTCCCAATGCAGTTGTTGCTAAAGATGGGAGCGGGCAATTTAAGACTGTTTTGGATGCCATTAATGCGTACCCTAAAAACAATAAGGGGAGATATGTTATCTATGTTAAGGCTGGCATATATGATGAGTATATTACTGTGGATAAGAACAAGAAAAATATTTTGATGTATGGAGATGGCCACACCAAAACCATTATTACTGGTAATAAAAATTTTGTTGATGGCTGGAAGACAATGAGAACTGCTACCTTTGCGACAGTTGCTGAAGATTTCATTGCCAAGTCAATTGCATTCGAGAACACAGCCGGTGCAAGCAAACATCAAGCAGTGGCACTTCGCGTGCAAGGCGACCGCTCAGCTTTCTTCGACTGCGCCATTCGTGGCTTCCAGGACACACTATATGCCCACGCCCACCGCCAGTTTTATCGCAACTGCGAAATCTCCGGTACCGTTGACTTCATCTTCGGTTACTCCTCAACCATAGTCCAAAGCTCCAAGATCATCGTCCGAAAACCCGACCCAAACCAACAAAACATAGTGGTTGCAGATGGAACACCTCAGAAGAACATGCCCACAGGGGTAGTGCTACAAAACTGCGACATTTCACCAGAGGCTGAACTGGTTCCTATGAAACTAACGGTGAAGTCATATCTGGCGAGGCCATGGAAGGAGTATTCAAGGGCAATCTTCTTGGAGAACACAATTGGTGACTTGATTCAACCGGATGGGTATCTTCAGTGGTCAGGGAACATGTACCTAAACACTTGCTTCTTTGCTGAGTATGGAAACACCGGACCTGGGGCTAACGTTAATGCCAGAGTGAAGTGGGGTCGTGGGGTTCTTAATAAGAACGATGCTGCTCAGTACACTGCTGAACACTGGATTCAAGCTAGTACATGGTTGCCAGCTACTAGTATACCCTTTGATCCTGCCTTCACTAGAGGATGA 1707 0.4804 MEKTKVASAVSLLLVVGVAVGVVAIVRTNDEKVTGTTGNDGGLISTHSKAVKAMCQNSDDRRLCLDTLNPVNHTDPKEYISTVVKRSLESVIKAFNMSDRLRLEHDNSTPGVKMALEDCRDLLQFAIGELQATKTVLQGNTINHVHDRVADLKNWLGAVFAFQQSCLDGFHTHHEKQVRSQLQTGSLDHVGKVTALALDVVSRIAHVLSNFDLHLIVKPSSRRLIEVDQDGYPAWFGVTDRKLLGDVSKGGSIAPNAVVAKDGSGQFKTVLDAINAYPKNNKGRYVIYVKAGIYDEYITVDKNKKNILMYGDGHTKTIITGNKNFVDGWKTMRTATFATVAEDFIAKSIAFENTAGASKHQAVALRVQGDRSAFFDCAIRGFQDTLYAHAHRQFYRNCEISGTVDFIFGYSSTIVQSSKIIVRKPDPNQQNIVVADGTPQKNMPTGVVLQNCDISPEAELVPMKLTVKSYLARPWKEYSRAIFLENTIGDLIQPDGYLQWSGNMYLNTCFFAEYGNTGPGANVNARVKWGRGVLNKNDAAQYTAEHWIQASTWLPATSIPFDPAFTRG 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip09g01370 568 PANTHER PECTINESTERASE 3 562 - -
Aip09g01370 568 ProSitePatterns Pectinesterase signature 1. 281 300 IPR018040 -
Aip09g01370 568 Pfam Pectinesterase 256 550 IPR000070 GO:0030599|GO:0042545
Aip09g01370 568 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 49 202 IPR035513 -
Aip09g01370 568 Gene3D - 250 565 IPR012334 -
Aip09g01370 568 CDD PMEI-like_3 53 205 - -
Aip09g01370 568 Gene3D Invertase/pectin methylesterase inhibitor family protein 45 205 IPR035513 -
Aip09g01370 568 SUPERFAMILY Pectin lyase-like 253 561 IPR011050 -
Aip09g01370 568 ProSitePatterns Pectinesterase signature 2. 400 409 IPR033131 -
Aip09g01370 568 SMART PMEI_2 46 200 IPR006501 GO:0004857
Aip09g01370 568 PANTHER PECTINESTERASE 3 562 - -
Aip09g01370 568 Pfam Plant invertase/pectin methylesterase inhibitor 50 198 IPR006501 GO:0004857
Aip09g01370 568 TIGRFAM PME_inhib: pectinesterase inhibitor domain 46 179 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip09g01370 Aip-Chr9 23952032 23955788 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip09g01370 6 568 Carbohydrate Esterase AT3G05610 38.004 4.76e-134 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip09g01370 K01051 - gmx:100820142 816.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip06g00906 06 12601200 12603804 Aip09g01370 09 23952032 23955788 ECH
Aip09g01371 09 24011862 24014007 Aip09g01370 09 23952032 23955788 ECH
Aip09g01370 09 23952032 23955788 Aip09g01370 09 23952032 23955788 ECH
Aip06g00767 06 10226409 10228563 Aip09g01370 09 23952032 23955788 PCT